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C5AV03

- C5AV03_METEA

UniProt

C5AV03 - C5AV03_METEA

Protein

50S ribosomal protein L19

Gene

rplS

Organism
Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotation

    Enzyme and pathway databases

    BioCyciMEXT272630:GBY6-4914-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L19UniRule annotation
    Gene namesi
    Name:rplSUniRule annotationImported
    Ordered Locus Names:MexAM1_META1p5186Imported
    OrganismiMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1)Imported
    Taxonomic identifieri272630 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
    ProteomesiUP000009081: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi272630.MexAM1_META1p5186.

    Structurei

    3D structure databases

    ProteinModelPortaliC5AV03.
    SMRiC5AV03. Positions 17-119.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L19P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0335.
    HOGENOMiHOG000016264.
    KOiK02884.
    OMAiEAEQCAK.
    OrthoDBiEOG6DZF5W.

    Family and domain databases

    HAMAPiMF_00402. Ribosomal_L19.
    InterProiIPR001857. Ribosomal_L19.
    IPR018257. Ribosomal_L19_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR15680. PTHR15680. 1 hit.
    PfamiPF01245. Ribosomal_L19. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002191. Ribosomal_L19. 1 hit.
    PRINTSiPR00061. RIBOSOMALL19.
    SUPFAMiSSF50104. SSF50104. 1 hit.
    TIGRFAMsiTIGR01024. rplS_bact. 1 hit.
    PROSITEiPS01015. RIBOSOMAL_L19. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5AV03-1 [UniParc]FASTAAdd to Basket

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    MNIIEQLERE EVARLAKTIP DFEPGDTVIV NVRVKEGERT RVQAYEGVCI    50
    ARNGGGLNES FTVRKISYGE GVERVFPVHS PMIDSIKVVR RGKVRRAKLY 100
    YLRDRRGKSA RIVERSDRSD KAKAQKAAAA TAAE 134
    Length:134
    Mass (Da):15,058
    Last modified:July 28, 2009 - v1
    Checksum:iA66F894AD0A0D20A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001510 Genomic DNA. Translation: ACS42789.1.
    RefSeqiYP_002966066.1. NC_012808.1.

    Genome annotation databases

    EnsemblBacteriaiACS42789; ACS42789; MexAM1_META1p5186.
    GeneIDi7994955.
    KEGGimea:Mex_1p5186.
    PATRICi22516019. VBIMetExt101010_5055.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001510 Genomic DNA. Translation: ACS42789.1 .
    RefSeqi YP_002966066.1. NC_012808.1.

    3D structure databases

    ProteinModelPortali C5AV03.
    SMRi C5AV03. Positions 17-119.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272630.MexAM1_META1p5186.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS42789 ; ACS42789 ; MexAM1_META1p5186 .
    GeneIDi 7994955.
    KEGGi mea:Mex_1p5186.
    PATRICi 22516019. VBIMetExt101010_5055.

    Phylogenomic databases

    eggNOGi COG0335.
    HOGENOMi HOG000016264.
    KOi K02884.
    OMAi EAEQCAK.
    OrthoDBi EOG6DZF5W.

    Enzyme and pathway databases

    BioCyci MEXT272630:GBY6-4914-MONOMER.

    Family and domain databases

    HAMAPi MF_00402. Ribosomal_L19.
    InterProi IPR001857. Ribosomal_L19.
    IPR018257. Ribosomal_L19_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR15680. PTHR15680. 1 hit.
    Pfami PF01245. Ribosomal_L19. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002191. Ribosomal_L19. 1 hit.
    PRINTSi PR00061. RIBOSOMALL19.
    SUPFAMi SSF50104. SSF50104. 1 hit.
    TIGRFAMsi TIGR01024. rplS_bact. 1 hit.
    PROSITEi PS01015. RIBOSOMAL_L19. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 14718 / DSM 1338 / AM1Imported.

    Entry informationi

    Entry nameiC5AV03_METEA
    AccessioniPrimary (citable) accession number: C5AV03
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3