C5AV03 (C5AV03_METEA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L19 HAMAP-Rule MF_00402 RuleBase RU000559

Gene names

Name:	rplS HAMAP-Rule MF_00402 EMBL ACS42789.1
Ordered Locus Names:	MexAM1_META1p5186 EMBL ACS42789.1

Organism

Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) [Complete proteome] [HAMAP] EMBL ACS42789.1

Taxonomic identifier

272630 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium extorquens group › Methylobacterium extorquens

Protein attributes

Sequence length	134 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity. HAMAP-Rule MF_00402 RuleBase RU000559
Sequence similarities	Belongs to the ribosomal protein L19P family. HAMAP-Rule MF_00402 RuleBase RU000559

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00402
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5AV03 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: A66F894AD0A0D20A	FASTA	134	15,058
	10 20 30 40 50 60 MNIIEQLERE EVARLAKTIP DFEPGDTVIV NVRVKEGERT RVQAYEGVCI ARNGGGLNES 70 80 90 100 110 120 FTVRKISYGE GVERVFPVHS PMIDSIKVVR RGKVRRAKLY YLRDRRGKSA RIVERSDRSD 130 KAKAQKAAAA TAAE

References

[1]

"Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources." Vuilleumier S., Chistoserdova L., Lee M.C., Bringel F., Lajus A., Zhou Y., Gourion B., Barbe V., Chang J., Cruveiller S., Dossat C., Gillett W., Gruffaz C., Haugen E., Hourcade E., Levy R., Mangenot S., Muller E. , Nadalig T., Pagni M., Penny C., Peyraud R., Robinson D.G., Roche D., Rouy Z., Saenampechek C., Salvignol G., Vallenet D., Wu Z., Marx C.J., Vorholt J.A., Olson M.V., Kaul R., Weissenbach J., Medigue C., Lidstrom M.E. PLoS ONE 4:E5584-E5584(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 14718 / DSM 1338 / AM1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001510 Genomic DNA. Translation: ACS42789.1.
RefSeq	YP_002966066.1. NC_012808.1.
3D structure databases
ProteinModelPortal	C5AV03.
SMR	C5AV03. Positions 17-119.
ModBase	Search...
Protein-protein interaction databases
STRING	272630.MexAM1_META1p5186.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS42789; ACS42789; MexAM1_META1p5186.
GeneID	7994955.
KEGG	mea:Mex_1p5186.
PATRIC	22516019. VBIMetExt101010_5055.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0335.
HOGENOM	HOG000016264.
KO	K02884.
OMA	EAKRTLP.
ProtClustDB	PRK05338.
Family and domain databases
HAMAP	MF_00402. Ribosomal_L19.
InterPro	IPR001857. Ribosomal_L19. IPR018257. Ribosomal_L19_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
PANTHER	PTHR15680. PTHR15680. 1 hit.
Pfam	PF01245. Ribosomal_L19. 1 hit. [Graphical view]
PIRSF	PIRSF002191. Ribosomal_L19. 1 hit.
PRINTS	PR00061. RIBOSOMALL19.
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01024. rplS_bact. 1 hit.
PROSITE	PS01015. RIBOSOMAL_L19. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5AV03_METEA

Accession

Primary (citable) accession number: C5AV03

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)