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C5AV03 (C5AV03_METEA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length134 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity. HAMAP-Rule MF_00402 RuleBase RU000559

Sequence similarities

Belongs to the ribosomal protein L19P family. HAMAP-Rule MF_00402 RuleBase RU000559

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein HAMAP-Rule MF_00402
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5AV03 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: A66F894AD0A0D20A

FASTA13415,058
        10         20         30         40         50         60 
MNIIEQLERE EVARLAKTIP DFEPGDTVIV NVRVKEGERT RVQAYEGVCI ARNGGGLNES 

        70         80         90        100        110        120 
FTVRKISYGE GVERVFPVHS PMIDSIKVVR RGKVRRAKLY YLRDRRGKSA RIVERSDRSD 

       130 
KAKAQKAAAA TAAE 

« Hide

References

[1]"Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources."
Vuilleumier S., Chistoserdova L., Lee M.-C., Bringel F., Lajus A., Zhou Y., Gourion B., Barbe V., Chang J., Cruveiller S., Dossat C., Gillett W., Gruffaz C., Haugen E., Hourcade E., Levy R., Mangenot S., Muller E. expand/collapse author list , Nadalig T., Pagni M., Penny C., Peyraud R., Robinson D.G., Roche D., Rouy Z., Saenampechek C., Salvignol G., Vallenet D., Wu Z., Marx C.J., Vorholt J.A., Olson M.V., Kaul R., Weissenbach J., Medigue C., Lidstrom M.E.
PLoS ONE 4:E5584-E5584(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14718 / DSM 1338 / AM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001510 Genomic DNA. Translation: ACS42789.1.
RefSeqYP_002966066.1. NC_012808.1.

3D structure databases

ProteinModelPortalC5AV03.
SMRC5AV03. Positions 17-119.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272630.MexAM1_META1p5186.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS42789; ACS42789; MexAM1_META1p5186.
GeneID7994955.
KEGGmea:Mex_1p5186.
PATRIC22516019. VBIMetExt101010_5055.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0335.
HOGENOMHOG000016264.
KOK02884.
OMAEAEQCAK.
OrthoDBEOG6DZF5W.

Enzyme and pathway databases

BioCycMEXT272630:GBY6-4914-MONOMER.

Family and domain databases

HAMAPMF_00402. Ribosomal_L19.
InterProIPR001857. Ribosomal_L19.
IPR018257. Ribosomal_L19_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERPTHR15680. PTHR15680. 1 hit.
PfamPF01245. Ribosomal_L19. 1 hit.
[Graphical view]
PIRSFPIRSF002191. Ribosomal_L19. 1 hit.
PRINTSPR00061. RIBOSOMALL19.
SUPFAMSSF50104. SSF50104. 1 hit.
TIGRFAMsTIGR01024. rplS_bact. 1 hit.
PROSITEPS01015. RIBOSOMAL_L19. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5AV03_METEA
AccessionPrimary (citable) accession number: C5AV03
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 9, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)