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C5ARS1 (C5ARS1_METEA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.28 EMBL ACS42409.1
Gene names
Name:ldhA EMBL ACS42409.1
Ordered Locus Names:MexAM1_META1p4794 EMBL ACS42409.1
OrganismMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) [Complete proteome] [HAMAP] EMBL ACS42409.1
Taxonomic identifier272630 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium

Protein attributes

Sequence length336 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU003720 EMBL ACS42409.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionD-lactate dehydrogenase activity

Inferred from electronic annotation. Source: UniProtKB-EC

NAD binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5ARS1 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 6B59EA8B8BEE9C3F

FASTA33635,798
        10         20         30         40         50         60 
MDVTIFSTKA YDRRFLDGAN AAAGEPHRLR YLEARLTHES APLTQGAQAV CAFVNDVLDR 

        70         80         90        100        110        120 
PVLEVLAASG TRMVALRSAG FNNVDLPAAA ELGIAGGRVP AYSPDAVAEH TVALILALNR 

       130        140        150        160        170        180 
KTHRAYARVR EGNFALEGLL GFDLKGRTVG IVGTGKIGRA VARILAGFGC RVLAYDPMPS 

       190        200        210        220        230        240 
AELADFGAEA VGLDRLLAEA DIVSLHCPLT PDTHHMIDRA ALARMKRGVM LINTGRGALV 

       250        260        270        280        290        300 
DTAALIEGLK SGVIGDLGLD VYEEEGGLFF EDLSNQIIRD DVFSRLLTFP NVIVTGHQAF 

       310        320        330 
FTAEALAAIA ATTIENLSCF ETQGVPRHPV SVERLA 

« Hide

References

[1]"Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources."
Vuilleumier S., Chistoserdova L., Lee M.-C., Bringel F., Lajus A., Zhou Y., Gourion B., Barbe V., Chang J., Cruveiller S., Dossat C., Gillett W., Gruffaz C., Haugen E., Hourcade E., Levy R., Mangenot S., Muller E. expand/collapse author list , Nadalig T., Pagni M., Penny C., Peyraud R., Robinson D.G., Roche D., Rouy Z., Saenampechek C., Salvignol G., Vallenet D., Wu Z., Marx C.J., Vorholt J.A., Olson M.V., Kaul R., Weissenbach J., Medigue C., Lidstrom M.E.
PLoS ONE 4:E5584-E5584(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14718 / DSM 1338 / AM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001510 Genomic DNA. Translation: ACS42409.1.
RefSeqYP_002965686.1. NC_012808.1.

3D structure databases

ProteinModelPortalC5ARS1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272630.MexAM1_META1p4794.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS42409; ACS42409; MexAM1_META1p4794.
GeneID7994567.
KEGGmea:Mex_1p4794.
PATRIC22515229. VBIMetExt101010_4666.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1052.
HOGENOMHOG000136695.
KOK03778.
OMAFNMHGRT.
OrthoDBEOG61VZ8G.

Enzyme and pathway databases

BioCycMEXT272630:GBY6-4526-MONOMER.

Family and domain databases

Gene3D3.40.50.720. 2 hits.
InterProIPR006139. D-isomer_2_OHA_DH_cat_dom.
IPR006140. D-isomer_2_OHA_DH_NAD-bd.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamPF00389. 2-Hacid_dh. 1 hit.
PF02826. 2-Hacid_dh_C. 1 hit.
[Graphical view]
PROSITEPS00065. D_2_HYDROXYACID_DH_1. 1 hit.
PS00670. D_2_HYDROXYACID_DH_2. 1 hit.
PS00671. D_2_HYDROXYACID_DH_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5ARS1_METEA
AccessionPrimary (citable) accession number: C5ARS1
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 9, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)