Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C5AMU8

- C5AMU8_BURGB

UniProt

C5AMU8 - C5AMU8_BURGB

Protein
Submitted name:

ATP dependent DNA ligase

Gene

bglu_2g07300

Organism
Burkholderia glumae (strain BGR1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBGLU626418:GJI5-4229-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:bglu_2g07300Imported
    OrganismiBurkholderia glumae (strain BGR1)Imported
    Taxonomic identifieri626418 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000002187: Chromosome 2

    Interactioni

    Protein-protein interaction databases

    STRINGi626418.bglu_2g07300.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5AMU8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRFATLYAA LDATTSTNVK LEALIAYFAS AAPEDAAWAS YFLAGGKPRQ    50
    TVPTRVLAEA ARERAGLPAW LFEESYQAVG DLAETIAHVL PPPARESALG 100
    LAQWIEQRVL GLRGLDAAAL RERLAGYWDE LDWSERFLLT KLIGGGFRVG 150
    VSRQLVVRAL AQVAGVDHKR IAQRMVGWTD SRQTPSAARY LRLIAPAGDG 200
    DDPARPHESD LGLPYPFFLA HPLQADPATL GPVEDWIVEW KWDGIRAQLV 250
    KRAGRVWLWS RGEDLVTERF PELAALGEAL PDGTVIDGEI LAWEPGAAAP 300
    LPFARLQPRI TRKSLTRKVL ADSPAALLAY DLLEAEGRDL RAVPLATRRT 350
    RLEALAAALS RTLAVDLLRV SPRVTADGWP ALAARRAESR ARGVEGLMLK 400
    AAASEYGVGR TKASGVWWKW KIEPYAIDAV LLYAQRGHGR RASLYTDFTF 450
    AVWDEAGGVR TLVPFAKAYS GLTDEEMRQV DAVVRKTTIE KFGPVRSVTP 500
    TLVFEIGFEG IQASPRHKSG IAVRFPRMLR WRTDKSIDEA DTLEMLKGFL 550
    NGAPA 555
    Length:555
    Mass (Da):61,024
    Last modified:July 28, 2009 - v1
    Checksum:iE5E5BC7A368B051F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001504 Genomic DNA. Translation: ACR31149.1.
    RefSeqiYP_002908384.1. NC_012721.2.

    Genome annotation databases

    EnsemblBacteriaiACR31149; ACR31149; bglu_2g07300.
    GeneIDi7904366.
    KEGGibgl:bglu_2g07300.
    PATRICi19103713. VBIBurGlu130723_0969.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001504 Genomic DNA. Translation: ACR31149.1 .
    RefSeqi YP_002908384.1. NC_012721.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 626418.bglu_2g07300.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACR31149 ; ACR31149 ; bglu_2g07300 .
    GeneIDi 7904366.
    KEGGi bgl:bglu_2g07300.
    PATRICi 19103713. VBIBurGlu130723_0969.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci BGLU626418:GJI5-4229-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Burkholderia glumae BGR1."
      Lim J., Lee T.-H., Nahm B.H., Choi Y.D., Kim M., Hwang I.
      J. Bacteriol. 191:3758-3759(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BGR1Imported.

    Entry informationi

    Entry nameiC5AMU8_BURGB
    AccessioniPrimary (citable) accession number: C5AMU8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3