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C5AMU8

- C5AMU8_BURGB

UniProt

C5AMU8 - C5AMU8_BURGB

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
bglu_2g07300
Organism
Burkholderia glumae (strain BGR1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBGLU626418:GJI5-4229-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:bglu_2g07300Imported
OrganismiBurkholderia glumae (strain BGR1)Imported
Taxonomic identifieri626418 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000002187: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi626418.bglu_2g07300.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5AMU8-1 [UniParc]FASTAAdd to Basket

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MKRFATLYAA LDATTSTNVK LEALIAYFAS AAPEDAAWAS YFLAGGKPRQ    50
TVPTRVLAEA ARERAGLPAW LFEESYQAVG DLAETIAHVL PPPARESALG 100
LAQWIEQRVL GLRGLDAAAL RERLAGYWDE LDWSERFLLT KLIGGGFRVG 150
VSRQLVVRAL AQVAGVDHKR IAQRMVGWTD SRQTPSAARY LRLIAPAGDG 200
DDPARPHESD LGLPYPFFLA HPLQADPATL GPVEDWIVEW KWDGIRAQLV 250
KRAGRVWLWS RGEDLVTERF PELAALGEAL PDGTVIDGEI LAWEPGAAAP 300
LPFARLQPRI TRKSLTRKVL ADSPAALLAY DLLEAEGRDL RAVPLATRRT 350
RLEALAAALS RTLAVDLLRV SPRVTADGWP ALAARRAESR ARGVEGLMLK 400
AAASEYGVGR TKASGVWWKW KIEPYAIDAV LLYAQRGHGR RASLYTDFTF 450
AVWDEAGGVR TLVPFAKAYS GLTDEEMRQV DAVVRKTTIE KFGPVRSVTP 500
TLVFEIGFEG IQASPRHKSG IAVRFPRMLR WRTDKSIDEA DTLEMLKGFL 550
NGAPA 555
Length:555
Mass (Da):61,024
Last modified:July 28, 2009 - v1
Checksum:iE5E5BC7A368B051F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001504 Genomic DNA. Translation: ACR31149.1.
RefSeqiYP_002908384.1. NC_012721.2.

Genome annotation databases

EnsemblBacteriaiACR31149; ACR31149; bglu_2g07300.
GeneIDi7904366.
KEGGibgl:bglu_2g07300.
PATRICi19103713. VBIBurGlu130723_0969.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001504 Genomic DNA. Translation: ACR31149.1 .
RefSeqi YP_002908384.1. NC_012721.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 626418.bglu_2g07300.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACR31149 ; ACR31149 ; bglu_2g07300 .
GeneIDi 7904366.
KEGGi bgl:bglu_2g07300.
PATRICi 19103713. VBIBurGlu130723_0969.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci BGLU626418:GJI5-4229-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Burkholderia glumae BGR1."
    Lim J., Lee T.H., Nahm B.H., Choi Y.D., Kim M., Hwang I.
    J. Bacteriol. 191:3758-3759(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BGR1Imported.

Entry informationi

Entry nameiC5AMU8_BURGB
AccessioniPrimary (citable) accession number: C5AMU8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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