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C5AJX5 (C5AJX5_BURGB) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:bglu_2g18790 EMBL ACR32205.1
OrganismBurkholderia glumae (strain BGR1) [Complete proteome] [HAMAP] EMBL ACR32205.1
Taxonomic identifier626418 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length540 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region222 – 2243Oxaloacetate binding PDB 4NNB
Region275 – 2795Oxaloacetate binding PDB 4NNB
Region277 – 2793Oxalic acid binding PDB 4NNC

Sites

Metal binding2221Cobalt; via tele nitrogen PDB 4NNC
Metal binding2221Magnesium; via tele nitrogen PDB 4NNA PDB 4NNB
Metal binding2241Cobalt; via tele nitrogen PDB 4NNC
Metal binding2241Magnesium; via tele nitrogen PDB 4NNA PDB 4NNB
Metal binding4731Cobalt PDB 4NNC
Metal binding4731Magnesium PDB 4NNA PDB 4NNB
Binding site3081Oxaloacetate PDB 4NNB
Binding site3221Oxalic acid PDB 4NNC
Binding site3221Oxaloacetate PDB 4NNB
Binding site4731Oxalic acid PDB 4NNC
Binding site4731Oxaloacetate PDB 4NNB

Sequences

Sequence LengthMass (Da)Tools
C5AJX5 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 025AE6F67EB55FFB

FASTA54059,118
        10         20         30         40         50         60 
MTSLYITAAP IGAVPKFLDP FEATFIPSFL LEGFFDADRC ASIAADLKTD GWEVVPAGGR 

        70         80         90        100        110        120 
LLQVGHAQPI DERLLAGNAQ AATIRQALEA ARWTRRDGAW HPPRLAAPNA AHFPKPWLAA 

       130        140        150        160        170        180 
LSNKLARRIV LQLTTYGWIV SEQGDLLWEH ERQHHYLPPA LIEAIEKESP ALLKNMEEAG 

       190        200        210        220        230        240 
WIACAAGYWQ AGKARSPYLP ITPEAITEET IRSMRAGAAV VHLHTRDLSD RRRIEIPGLG 

       250        260        270        280        290        300 
VVTVGSQRNQ IVLDDYDAIV PMVKKREPAA ILNLSTSVRG DRHGARSKLR RAHLKFYDDV 

       310        320        330        340        350        360 
GSAPEVASLS PAAVVFQGGG GYDNAPDFLD AQFDHFERVG TRPEVEVFNH AIVDNATSLY 

       370        380        390        400        410        420 
RDRLLRTGKP VLFMLVAGVD QYRRDPITGE VEDDSLIARV VREEISSLLA DESADSHRRA 

       430        440        450        460        470        480 
VELAIGQLRP VVERLRASFP VSKISILLPG PMQNLLVDVA LGLGLDGIRV GLEDGLTVND 

       490        500        510        520        530        540 
ARVPGGVRKA RGTWEQVSLV REELLGRGAT ILTAAQVRDM FGLGIKPAAR RERDPQTAAG 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Burkholderia glumae BGR1."
Lim J., Lee T.H., Nahm B.H., Choi Y.D., Kim M., Hwang I.
J. Bacteriol. 191:3758-3759(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BGR1 EMBL ACR32205.1.
[2]"Structural Basis for Bacterial Quorum Sensing-mediated Oxalogenesis."
Oh J., Goo E., Hwang I., Rhee S.
J. Biol. Chem. 289:11465-11475(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) IN COMPLEX WITH COBALT; MAGNESIUM; OXALIC ACID AND OXALOACETATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001504 Genomic DNA. Translation: ACR32205.1.
RefSeqYP_002909440.1. NC_012721.2.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4NNAX-ray2.10A1-540[»]
4NNBX-ray2.00A1-540[»]
4NNCX-ray2.28A1-540[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING626418.bglu_2g18790.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR32205; ACR32205; bglu_2g18790.
GeneID7903568.
KEGGbgl:bglu_2g18790.
PATRIC19106202. VBIBurGlu130723_2213.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG150209.
OMAHAIVDNA.
OrthoDBEOG6PGK0X.

Enzyme and pathway databases

BioCycBGLU626418:GJI5-5382-MONOMER.

Family and domain databases

Gene3D3.20.20.70. 2 hits.
InterProIPR013785. Aldolase_TIM.
IPR008567. KCE_family.
[Graphical view]
PfamPF05853. DUF849. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5AJX5_BURGB
AccessionPrimary (citable) accession number: C5AJX5
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 9, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)