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C5ADZ9

- C5ADZ9_BURGB

UniProt

C5ADZ9 - C5ADZ9_BURGB

Protein
Submitted name:

DNA primase small subunit

Gene

bglu_1g10900

Organism
Burkholderia glumae (strain BGR1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Enzyme and pathway databases

    BioCyciBGLU626418:GJI5-1117-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA primase small subunitImported
    Gene namesi
    Ordered Locus Names:bglu_1g10900Imported
    OrganismiBurkholderia glumae (strain BGR1)Imported
    Taxonomic identifieri626418 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000002187: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi626418.bglu_1g10900.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiNGLPDFQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5ADZ9-1 [UniParc]FASTAAdd to Basket

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    MTDTLSEYQR KRRFDATPEP AGAKRRGAPA RRRDGAAAPL RFVVQVHHAR    50
    RLHYDFRLEL DGVLKSWAVP KGPSPDPADK RLAIQVEDHP LDYASFEGEI 100
    PPGHYGAGSV RIDDAGVWRP EGGVAGARRG YRDGKLTFEL DGAKLRGRWS 150
    LTRTAMPGSR GKSSWLLVRA HEDAAGSEPA DQAADQLVDQ AAARRRTRQG 200
    RPAAKPAAKR PAKPAAAQPA ASASGTATAL PGARRAALPD ALAPQLATLV 250
    AAPPEDEGWR YEMKFDGYRV LIRIAGRGGR RSVRVLTREG LDWSAKFGAQ 300
    CAAFAALPVD DAWLDAEAVV LDARGVPDFA ALQRALSDGD DAAIVCFVFD 350
    LLHLDGRALQ AVPLDARRAR LAALLAGADS GCLRFSPTLD GAPAALLEAA 400
    ARAGLEGLIG KRADGAYRAG RSRQWIKLKC RQRQEFVIGG YSAPRGSRSH 450
    FGALLLGVHA APPRSTRRGG QAARERALQY VGRVGTGFDA QQLAALAKRL 500
    AALERERAPF AVPPPSRGDA VRWVEPRLVA ECEFAGWTRD GLLRQAAFIA 550
    LREDKPTARV VRETALPTAG RTTGGSMDSN EAASAGHAAR RRRGGADEPV 600
    EAGQARPAGA ASVAGVRITH PERVVDAQGG FRKIDVVRYY ESVARWLLPQ 650
    LSGRPVSLVR YMKGIGGESF FQKHAGARGM GFVTRHPGLD PGHDALMTLD 700
    DTAALVGAAQ FDAIEFHTWN ATVDRIERPE RLVFDLDPDP ALPWERMIEA 750
    AGLVRALLEA LGLPAFCKTS GGKGLHVVVP IVRHTEWDDA KAFSQAVARH 800
    LAGQLPERFT AKMGPENRRG LIFVDYLRNG RGASTVAAYS ARARPGMGVS 850
    VPLAWEEVAA TTGGAQWTIA NLSARLDAQR ADPWDGYDAA RTRITAAMRK 900
    RLGER 905
    Length:905
    Mass (Da):97,421
    Last modified:July 28, 2009 - v1
    Checksum:iDE8090E26A002EFF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001503 Genomic DNA. Translation: ACR28259.1.
    RefSeqiWP_012735147.1. NC_012724.2.
    YP_002910963.1. NC_012724.2.

    Genome annotation databases

    EnsemblBacteriaiACR28259; ACR28259; bglu_1g10900.
    GeneIDi7906330.
    KEGGibgl:bglu_1g10900.
    PATRICi19109570. VBIBurGlu130723_3867.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001503 Genomic DNA. Translation: ACR28259.1 .
    RefSeqi WP_012735147.1. NC_012724.2.
    YP_002910963.1. NC_012724.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 626418.bglu_1g10900.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACR28259 ; ACR28259 ; bglu_1g10900 .
    GeneIDi 7906330.
    KEGGi bgl:bglu_1g10900.
    PATRICi 19109570. VBIBurGlu130723_3867.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi NGLPDFQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci BGLU626418:GJI5-1117-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Burkholderia glumae BGR1."
      Lim J., Lee T.-H., Nahm B.H., Choi Y.D., Kim M., Hwang I.
      J. Bacteriol. 191:3758-3759(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BGR1Imported.

    Entry informationi

    Entry nameiC5ADZ9_BURGB
    AccessioniPrimary (citable) accession number: C5ADZ9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3