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C5ADZ9 (C5ADZ9_BURGB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:bglu_1g10900 EMBL ACR28259.1
OrganismBurkholderia glumae (strain BGR1) [Complete proteome] [HAMAP] EMBL ACR28259.1
Taxonomic identifier626418 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length905 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C5ADZ9 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: DE8090E26A002EFF

FASTA90597,421
        10         20         30         40         50         60 
MTDTLSEYQR KRRFDATPEP AGAKRRGAPA RRRDGAAAPL RFVVQVHHAR RLHYDFRLEL 

        70         80         90        100        110        120 
DGVLKSWAVP KGPSPDPADK RLAIQVEDHP LDYASFEGEI PPGHYGAGSV RIDDAGVWRP 

       130        140        150        160        170        180 
EGGVAGARRG YRDGKLTFEL DGAKLRGRWS LTRTAMPGSR GKSSWLLVRA HEDAAGSEPA 

       190        200        210        220        230        240 
DQAADQLVDQ AAARRRTRQG RPAAKPAAKR PAKPAAAQPA ASASGTATAL PGARRAALPD 

       250        260        270        280        290        300 
ALAPQLATLV AAPPEDEGWR YEMKFDGYRV LIRIAGRGGR RSVRVLTREG LDWSAKFGAQ 

       310        320        330        340        350        360 
CAAFAALPVD DAWLDAEAVV LDARGVPDFA ALQRALSDGD DAAIVCFVFD LLHLDGRALQ 

       370        380        390        400        410        420 
AVPLDARRAR LAALLAGADS GCLRFSPTLD GAPAALLEAA ARAGLEGLIG KRADGAYRAG 

       430        440        450        460        470        480 
RSRQWIKLKC RQRQEFVIGG YSAPRGSRSH FGALLLGVHA APPRSTRRGG QAARERALQY 

       490        500        510        520        530        540 
VGRVGTGFDA QQLAALAKRL AALERERAPF AVPPPSRGDA VRWVEPRLVA ECEFAGWTRD 

       550        560        570        580        590        600 
GLLRQAAFIA LREDKPTARV VRETALPTAG RTTGGSMDSN EAASAGHAAR RRRGGADEPV 

       610        620        630        640        650        660 
EAGQARPAGA ASVAGVRITH PERVVDAQGG FRKIDVVRYY ESVARWLLPQ LSGRPVSLVR 

       670        680        690        700        710        720 
YMKGIGGESF FQKHAGARGM GFVTRHPGLD PGHDALMTLD DTAALVGAAQ FDAIEFHTWN 

       730        740        750        760        770        780 
ATVDRIERPE RLVFDLDPDP ALPWERMIEA AGLVRALLEA LGLPAFCKTS GGKGLHVVVP 

       790        800        810        820        830        840 
IVRHTEWDDA KAFSQAVARH LAGQLPERFT AKMGPENRRG LIFVDYLRNG RGASTVAAYS 

       850        860        870        880        890        900 
ARARPGMGVS VPLAWEEVAA TTGGAQWTIA NLSARLDAQR ADPWDGYDAA RTRITAAMRK 


RLGER 

« Hide

References

[1]"Complete genome sequence of Burkholderia glumae BGR1."
Lim J., Lee T.H., Nahm B.H., Choi Y.D., Kim M., Hwang I.
J. Bacteriol. 191:3758-3759(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BGR1 EMBL ACR28259.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001503 Genomic DNA. Translation: ACR28259.1.
RefSeqYP_002910963.1. NC_012724.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING626418.bglu_1g10900.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR28259; ACR28259; bglu_1g10900.
GeneID7906330.
KEGGbgl:bglu_1g10900.
PATRIC19109570. VBIBurGlu130723_3867.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycBGLU626418:GJI5-1117-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5ADZ9_BURGB
AccessionPrimary (citable) accession number: C5ADZ9
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)