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C5A3B2

- C5A3B2_THEGJ

UniProt

C5A3B2 - C5A3B2_THEGJ

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Protein
Submitted name: Alpha-amylase (AmyA)
Gene
amyA-1, TGAM_0222
Organism
Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciTGAM593117:GHFT-226-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase (AmyA)Imported (EC:3.2.1.1Imported)
Gene namesi
Name:amyA-1Imported
Ordered Locus Names:TGAM_0222Imported
OrganismiThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)Imported
Taxonomic identifieri593117 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000001488: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi593117.TGAM_0222.

Structurei

3D structure databases

ProteinModelPortaliC5A3B2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000031038.
KOiK01176.
OMAiYRDYEEW.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C5A3B2-1 [UniParc]FASTAAdd to Basket

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MGVVPALSQG GMEMRRYTRV LILLMALFLL AGLYYPSASA AKYSELEQGG    50
VIMQAFYWDV PAGGIWWDTI RQKIPEWYDA GISAIWIPPA SKGMGGAYSM 100
GYDPYDYFDL GEFYQKGTVE TRFGSKEELV NMISTAHRYG IKVIADIVIN 150
HRAGGDLEWN PYVGDYTWTD FSQVASGKYK AHYMDFHPNN YSTSDEGTFG 200
GFPDIDHLVP FNKYWLWASD ESYAAYLRSI GVDAWRFDYV KGYGAWVVKD 250
WLSWWGGWAV GEYWDTDVNA LLNWAYDSGA KVFDFPLYYK MDEAFDNKNI 300
PALVYAIQNG GTVVSRDPFK AVTFVANHDT NIIWNKYPAY AFILTYEGQP 350
VIFYRDYEEW LNKDKLNNLI WIHEHLAGGS TKILYYDDDE LIFMREGYGD 400
RPGLITYINL GSGWAERWVN VGSKFAGYTI HEYTGNLGGW VDRYVYYNGW 450
VKLTAPPHDP ANGYYGYSVW SYAGVG 476
Length:476
Mass (Da):54,452
Last modified:July 28, 2009 - v1
Checksum:iA42B04BB626447C5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001398 Genomic DNA. Translation: ACS32724.1.
RefSeqiYP_002958588.1. NC_012804.1.

Genome annotation databases

EnsemblBacteriaiACS32724; ACS32724; TGAM_0222.
GeneIDi7988797.
KEGGitga:TGAM_0222.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001398 Genomic DNA. Translation: ACS32724.1 .
RefSeqi YP_002958588.1. NC_012804.1.

3D structure databases

ProteinModelPortali C5A3B2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 593117.TGAM_0222.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS32724 ; ACS32724 ; TGAM_0222 .
GeneIDi 7988797.
KEGGi tga:TGAM_0222.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000031038.
KOi K01176.
OMAi YRDYEEW.

Enzyme and pathway databases

BioCyci TGAM593117:GHFT-226-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea."
    Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., Anthouard V., Forterre P., Wincker P., Confalonieri F.
    Genome Biol. 10:R70.1-R70.23(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15229 / JCM 11827 / EJ3.

Entry informationi

Entry nameiC5A3B2_THEGJ
AccessioniPrimary (citable) accession number: C5A3B2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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