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C5A3B2

- C5A3B2_THEGJ

UniProt

C5A3B2 - C5A3B2_THEGJ

Protein
Submitted name:

Alpha-amylase (AmyA)

Gene

amyA-1

Organism
Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciTGAM593117:GHFT-226-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylase (AmyA)Imported (EC:3.2.1.1Imported)
    Gene namesi
    Name:amyA-1Imported
    Ordered Locus Names:TGAM_0222Imported
    OrganismiThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)Imported
    Taxonomic identifieri593117 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
    ProteomesiUP000001488: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi593117.TGAM_0222.

    Structurei

    3D structure databases

    ProteinModelPortaliC5A3B2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000031038.
    KOiK01176.
    OMAiYRDYEEW.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C5A3B2-1 [UniParc]FASTAAdd to Basket

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    MGVVPALSQG GMEMRRYTRV LILLMALFLL AGLYYPSASA AKYSELEQGG    50
    VIMQAFYWDV PAGGIWWDTI RQKIPEWYDA GISAIWIPPA SKGMGGAYSM 100
    GYDPYDYFDL GEFYQKGTVE TRFGSKEELV NMISTAHRYG IKVIADIVIN 150
    HRAGGDLEWN PYVGDYTWTD FSQVASGKYK AHYMDFHPNN YSTSDEGTFG 200
    GFPDIDHLVP FNKYWLWASD ESYAAYLRSI GVDAWRFDYV KGYGAWVVKD 250
    WLSWWGGWAV GEYWDTDVNA LLNWAYDSGA KVFDFPLYYK MDEAFDNKNI 300
    PALVYAIQNG GTVVSRDPFK AVTFVANHDT NIIWNKYPAY AFILTYEGQP 350
    VIFYRDYEEW LNKDKLNNLI WIHEHLAGGS TKILYYDDDE LIFMREGYGD 400
    RPGLITYINL GSGWAERWVN VGSKFAGYTI HEYTGNLGGW VDRYVYYNGW 450
    VKLTAPPHDP ANGYYGYSVW SYAGVG 476
    Length:476
    Mass (Da):54,452
    Last modified:July 28, 2009 - v1
    Checksum:iA42B04BB626447C5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001398 Genomic DNA. Translation: ACS32724.1.
    RefSeqiYP_002958588.1. NC_012804.1.

    Genome annotation databases

    EnsemblBacteriaiACS32724; ACS32724; TGAM_0222.
    GeneIDi7988797.
    KEGGitga:TGAM_0222.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001398 Genomic DNA. Translation: ACS32724.1 .
    RefSeqi YP_002958588.1. NC_012804.1.

    3D structure databases

    ProteinModelPortali C5A3B2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 593117.TGAM_0222.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS32724 ; ACS32724 ; TGAM_0222 .
    GeneIDi 7988797.
    KEGGi tga:TGAM_0222.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000031038.
    KOi K01176.
    OMAi YRDYEEW.

    Enzyme and pathway databases

    BioCyci TGAM593117:GHFT-226-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea."
      Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., Anthouard V., Forterre P., Wincker P., Confalonieri F.
      Genome Biol. 10:R70.1-R70.23(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 15229 / JCM 11827 / EJ3Imported.

    Entry informationi

    Entry nameiC5A3B2_THEGJ
    AccessioniPrimary (citable) accession number: C5A3B2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3