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C5A3B2 (C5A3B2_THEGJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length476 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACS32724.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5A3B2 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: A42B04BB626447C5

FASTA47654,452
        10         20         30         40         50         60 
MGVVPALSQG GMEMRRYTRV LILLMALFLL AGLYYPSASA AKYSELEQGG VIMQAFYWDV 

        70         80         90        100        110        120 
PAGGIWWDTI RQKIPEWYDA GISAIWIPPA SKGMGGAYSM GYDPYDYFDL GEFYQKGTVE 

       130        140        150        160        170        180 
TRFGSKEELV NMISTAHRYG IKVIADIVIN HRAGGDLEWN PYVGDYTWTD FSQVASGKYK 

       190        200        210        220        230        240 
AHYMDFHPNN YSTSDEGTFG GFPDIDHLVP FNKYWLWASD ESYAAYLRSI GVDAWRFDYV 

       250        260        270        280        290        300 
KGYGAWVVKD WLSWWGGWAV GEYWDTDVNA LLNWAYDSGA KVFDFPLYYK MDEAFDNKNI 

       310        320        330        340        350        360 
PALVYAIQNG GTVVSRDPFK AVTFVANHDT NIIWNKYPAY AFILTYEGQP VIFYRDYEEW 

       370        380        390        400        410        420 
LNKDKLNNLI WIHEHLAGGS TKILYYDDDE LIFMREGYGD RPGLITYINL GSGWAERWVN 

       430        440        450        460        470 
VGSKFAGYTI HEYTGNLGGW VDRYVYYNGW VKLTAPPHDP ANGYYGYSVW SYAGVG 

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References

[1]"Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea."
Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., Anthouard V., Forterre P., Wincker P., Confalonieri F.
Genome Biol. 10:R70.1-R70.23(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15229 / JCM 11827 / EJ3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001398 Genomic DNA. Translation: ACS32724.1.
RefSeqYP_002958588.1. NC_012804.1.

3D structure databases

ProteinModelPortalC5A3B2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING593117.TGAM_0222.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS32724; ACS32724; TGAM_0222.
GeneID7988797.
KEGGtga:TGAM_0222.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000031038.
KOK01176.
OMAYRDYEEW.

Enzyme and pathway databases

BioCycTGAM593117:GHFT-226-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC5A3B2_THEGJ
AccessionPrimary (citable) accession number: C5A3B2
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)