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C5A288

- C5A288_THEGJ

UniProt

C5A288 - C5A288_THEGJ

Protein
Submitted name:

ATP-dependent DNA ligase, putative

Gene

TGAM_2005

Organism
Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciTGAM593117:GHFT-2055-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase, putativeImported
    Gene namesi
    Ordered Locus Names:TGAM_2005Imported
    OrganismiThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)Imported
    Taxonomic identifieri593117 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
    ProteomesiUP000001488: Chromosome

    PTM / Processingi

    Proteomic databases

    PaxDbiC5A288.

    Interactioni

    Protein-protein interaction databases

    STRINGi593117.TGAM_2005.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1423.
    HOGENOMiHOG000224394.
    KOiK07468.
    OMAiEEKMNGY.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C5A288-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVSSIFRNLL LKLGLPEGRL EVLEGKGGLM EDEFEGIGYV RFRDSARGFR    50
    RGTVVFEDGT VVAGFPHIKR VVQLENGIRR IFRRRPFYVE EKVDGYNVRV 100
    VTVKGRILAL TRGGFVCPFT TERILDFINE EFFRDYPNLV LVGEMAGPES 150
    PYLVEGPPYV EEDIQFFLFD IQEKGTGRSI PAEERYKLAE EYGIPQVEVF 200
    GLYDRSMIEE LYDLIERLSR EGREGIVMKT PDMRKIAKYV TPYANINDIK 250
    IGSRIFFDLP HGYFMQRIKR LAFYLAEKRV RGEEFDEYAR ALGKALLRPF 300
    VESIHEVASG GEVEETFKVR VKNVSTAHKM VTHFERLGVK IHIEDIEDIG 350
    NGYWRITFKR VYPDATREIR ELWNGLAFVD 380
    Length:380
    Mass (Da):44,055
    Last modified:July 28, 2009 - v1
    Checksum:iA21B90B9F45F090B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001398 Genomic DNA. Translation: ACS34507.1.
    RefSeqiYP_002960371.1. NC_012804.1.

    Genome annotation databases

    EnsemblBacteriaiACS34507; ACS34507; TGAM_2005.
    GeneIDi7987062.
    KEGGitga:TGAM_2005.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001398 Genomic DNA. Translation: ACS34507.1 .
    RefSeqi YP_002960371.1. NC_012804.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 593117.TGAM_2005.

    Proteomic databases

    PaxDbi C5A288.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS34507 ; ACS34507 ; TGAM_2005 .
    GeneIDi 7987062.
    KEGGi tga:TGAM_2005.

    Phylogenomic databases

    eggNOGi COG1423.
    HOGENOMi HOG000224394.
    KOi K07468.
    OMAi EEKMNGY.

    Enzyme and pathway databases

    BioCyci TGAM593117:GHFT-2055-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea."
      Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., Anthouard V., Forterre P., Wincker P., Confalonieri F.
      Genome Biol. 10:R70.1-R70.23(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 15229 / JCM 11827 / EJ3Imported.

    Entry informationi

    Entry nameiC5A288_THEGJ
    AccessioniPrimary (citable) accession number: C5A288
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3