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Protein
Submitted name:

ATP-dependent DNA ligase, putative

Gene

TGAM_2005

Organism
Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciTGAM593117:G1GUW-2099-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase, putativeImported
Gene namesi
Ordered Locus Names:TGAM_2005Imported
OrganismiThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)Imported
Taxonomic identifieri593117 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000001488 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiC5A288

Interactioni

Protein-protein interaction databases

STRINGi593117.TGAM_2005

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini86 – 240RNA_ligaseInterPro annotationAdd BLAST155

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

C5A288-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSSIFRNLL LKLGLPEGRL EVLEGKGGLM EDEFEGIGYV RFRDSARGFR
60 70 80 90 100
RGTVVFEDGT VVAGFPHIKR VVQLENGIRR IFRRRPFYVE EKVDGYNVRV
110 120 130 140 150
VTVKGRILAL TRGGFVCPFT TERILDFINE EFFRDYPNLV LVGEMAGPES
160 170 180 190 200
PYLVEGPPYV EEDIQFFLFD IQEKGTGRSI PAEERYKLAE EYGIPQVEVF
210 220 230 240 250
GLYDRSMIEE LYDLIERLSR EGREGIVMKT PDMRKIAKYV TPYANINDIK
260 270 280 290 300
IGSRIFFDLP HGYFMQRIKR LAFYLAEKRV RGEEFDEYAR ALGKALLRPF
310 320 330 340 350
VESIHEVASG GEVEETFKVR VKNVSTAHKM VTHFERLGVK IHIEDIEDIG
360 370 380
NGYWRITFKR VYPDATREIR ELWNGLAFVD
Length:380
Mass (Da):44,055
Last modified:July 28, 2009 - v1
Checksum:iA21B90B9F45F090B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001398 Genomic DNA Translation: ACS34507.1
RefSeqiWP_015859610.1, NC_012804.1

Genome annotation databases

EnsemblBacteriaiACS34507; ACS34507; TGAM_2005
GeneIDi7987062
KEGGitga:TGAM_2005
PATRICifig|593117.10.peg.2015

Similar proteinsi

Entry informationi

Entry nameiC5A288_THEGJ
AccessioniPrimary (citable) accession number: C5A288
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 23, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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