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C5A288

- C5A288_THEGJ

UniProt

C5A288 - C5A288_THEGJ

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Protein
Submitted name:

ATP-dependent DNA ligase, putative

Gene

TGAM_2005

Organism
Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTGAM593117:GHFT-2055-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase, putativeImported
Gene namesi
Ordered Locus Names:TGAM_2005Imported
OrganismiThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)Imported
Taxonomic identifieri593117 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000001488: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiC5A288.

Interactioni

Protein-protein interaction databases

STRINGi593117.TGAM_2005.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

C5A288-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MVSSIFRNLL LKLGLPEGRL EVLEGKGGLM EDEFEGIGYV RFRDSARGFR
60 70 80 90 100
RGTVVFEDGT VVAGFPHIKR VVQLENGIRR IFRRRPFYVE EKVDGYNVRV
110 120 130 140 150
VTVKGRILAL TRGGFVCPFT TERILDFINE EFFRDYPNLV LVGEMAGPES
160 170 180 190 200
PYLVEGPPYV EEDIQFFLFD IQEKGTGRSI PAEERYKLAE EYGIPQVEVF
210 220 230 240 250
GLYDRSMIEE LYDLIERLSR EGREGIVMKT PDMRKIAKYV TPYANINDIK
260 270 280 290 300
IGSRIFFDLP HGYFMQRIKR LAFYLAEKRV RGEEFDEYAR ALGKALLRPF
310 320 330 340 350
VESIHEVASG GEVEETFKVR VKNVSTAHKM VTHFERLGVK IHIEDIEDIG
360 370 380
NGYWRITFKR VYPDATREIR ELWNGLAFVD
Length:380
Mass (Da):44,055
Last modified:July 28, 2009 - v1
Checksum:iA21B90B9F45F090B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001398 Genomic DNA. Translation: ACS34507.1.
RefSeqiYP_002960371.1. NC_012804.1.

Genome annotation databases

EnsemblBacteriaiACS34507; ACS34507; TGAM_2005.
GeneIDi7987062.
KEGGitga:TGAM_2005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001398 Genomic DNA. Translation: ACS34507.1 .
RefSeqi YP_002960371.1. NC_012804.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 593117.TGAM_2005.

Proteomic databases

PaxDbi C5A288.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS34507 ; ACS34507 ; TGAM_2005 .
GeneIDi 7987062.
KEGGi tga:TGAM_2005.

Phylogenomic databases

eggNOGi COG1423.
HOGENOMi HOG000224394.
KOi K07468.
OMAi EEKMNGY.

Enzyme and pathway databases

BioCyci TGAM593117:GHFT-2055-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea."
    Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., Anthouard V., Forterre P., Wincker P., Confalonieri F.
    Genome Biol. 10:R70.1-R70.23(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15229 / JCM 11827 / EJ3Imported.

Entry informationi

Entry nameiC5A288_THEGJ
AccessioniPrimary (citable) accession number: C5A288
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: October 1, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3