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Protein

30S ribosomal protein S11

Gene

rps11

Organism
Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Located on the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTGAM593117:G1GUW-2062-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S11UniRule annotation
Gene namesi
Name:rps11UniRule annotation
Ordered Locus Names:TGAM_1967
OrganismiThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Taxonomic identifieri593117 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000001488 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10002143761 – 13830S ribosomal protein S11Add BLAST138

Proteomic databases

PaxDbiC5A250

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi593117.TGAM_1967

Structurei

3D structure databases

SMRiC5A250
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS11 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04240 Archaea
COG0100 LUCA
HOGENOMiHOG000111598
KOiK02948
OMAiKVYVKGP
OrthoDBiPOG093Z0JMU

Family and domain databases

Gene3Di3.30.420.80, 1 hit
HAMAPiMF_01310 Ribosomal_S11, 1 hit
InterProiView protein in InterPro
IPR001971 Ribosomal_S11
IPR019961 Ribosomal_S11_archaeal
IPR018102 Ribosomal_S11_CS
IPR036967 Ribosomal_S11_sf
PANTHERiPTHR11759 PTHR11759, 1 hit
PfamiView protein in Pfam
PF00411 Ribosomal_S11, 1 hit
PIRSFiPIRSF002131 Ribosomal_S11, 1 hit
TIGRFAMsiTIGR03628 arch_S11P, 1 hit
PROSITEiView protein in PROSITE
PS00054 RIBOSOMAL_S11, 1 hit

Sequencei

Sequence statusi: Complete.

C5A250-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEEGQVNLK KKEKWGVAHI YSSYNNTIIH ITDITGAETV SRWSGGMVVK
60 70 80 90 100
ADRDEPSPYA AMIAARRAAE EAMEKGFVGV HIKVRAPGGS KSKSPGPGAQ
110 120 130
AAIRALARAG LRIGRVEDVT PIPHDGTRPK GGRRGRRV
Length:138
Mass (Da):14,812
Last modified:July 28, 2009 - v1
Checksum:i439650C437894A41
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001398 Genomic DNA Translation: ACS34469.1
RefSeqiWP_015859573.1, NC_012804.1

Genome annotation databases

EnsemblBacteriaiACS34469; ACS34469; TGAM_1967
GeneIDi7987024
KEGGitga:TGAM_1967
PATRICifig|593117.10.peg.1977

Similar proteinsi

Entry informationi

Entry nameiRS11_THEGJ
AccessioniPrimary (citable) accession number: C5A250
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 28, 2009
Last modified: May 23, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
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