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Protein

50S ribosomal protein L15e

Gene

rpl15e

Organism
Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15eUniRule annotation
Gene namesi
Name:rpl15eUniRule annotation
Ordered Locus Names:TGAM_1800
OrganismiThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Taxonomic identifieri593117 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000001488 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10002046201 – 19450S ribosomal protein L15eAdd BLAST194

Proteomic databases

PaxDbiC5A1N3.
PRIDEiC5A1N3.

Interactioni

Protein-protein interaction databases

STRINGi593117.TGAM_1800.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04209. Archaea.
COG1632. LUCA.
HOGENOMiHOG000229584.
KOiK02877.
OMAiQRKKQSD.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
HAMAPiMF_00256. Ribosomal_L15e. 1 hit.
InterProiIPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020926. Ribosomal_L15e_arc.
IPR020925. Ribosomal_L15e_CS.
IPR012678. Ribosomal_L23/L15e_core_dom.
[Graphical view]
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiPF00827. Ribosomal_L15e. 1 hit.
[Graphical view]
SMARTiSM01384. Ribosomal_L15e. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiPS01194. RIBOSOMAL_L15E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5A1N3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGMYKYIREA WKSPKKSYVG ELLKKRMIKW RREPVVVRIE RPTRLDRARS
60 70 80 90 100
LGYQAKQGYV VVRVRVRRGG RKRPRWKGGR KPSKMGMVKY SPKKSLQWIA
110 120 130 140 150
EEKAARKFPN LEVLNSYWVG EDGMYKWFEV IMVDPHHPVI KSDPKIAWIT
160 170 180 190
GKAHKGRVFR GLTSAGKKGR GLRNKGKGAE KVRPSVRANK GKTK
Length:194
Mass (Da):22,559
Last modified:July 28, 2009 - v1
Checksum:i8485714F126FCDA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001398 Genomic DNA. Translation: ACS34302.1.
RefSeqiWP_015859411.1. NC_012804.1.

Genome annotation databases

EnsemblBacteriaiACS34302; ACS34302; TGAM_1800.
GeneIDi7987627.
KEGGitga:TGAM_1800.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001398 Genomic DNA. Translation: ACS34302.1.
RefSeqiWP_015859411.1. NC_012804.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi593117.TGAM_1800.

Proteomic databases

PaxDbiC5A1N3.
PRIDEiC5A1N3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS34302; ACS34302; TGAM_1800.
GeneIDi7987627.
KEGGitga:TGAM_1800.

Phylogenomic databases

eggNOGiarCOG04209. Archaea.
COG1632. LUCA.
HOGENOMiHOG000229584.
KOiK02877.
OMAiQRKKQSD.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
HAMAPiMF_00256. Ribosomal_L15e. 1 hit.
InterProiIPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020926. Ribosomal_L15e_arc.
IPR020925. Ribosomal_L15e_CS.
IPR012678. Ribosomal_L23/L15e_core_dom.
[Graphical view]
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiPF00827. Ribosomal_L15e. 1 hit.
[Graphical view]
SMARTiSM01384. Ribosomal_L15e. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiPS01194. RIBOSOMAL_L15E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL15E_THEGJ
AccessioniPrimary (citable) accession number: C5A1N3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 28, 2009
Last modified: November 2, 2016
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.