C4ZW28 (C4ZW28_ECOBW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nickel transporter subunit EMBL ACR63889.1

Gene names

Name:	nikD EMBL ACR63889.1
Ordered Locus Names:	BWG_3170

Organism

Escherichia coli (strain K12 / MC4100 / BW2952) [Complete proteome] [HAMAP]

Taxonomic identifier

595496 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli (strain K12)

Protein attributes

Sequence length	254 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU000684 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	plasma membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW nickel cation binding Inferred from electronic annotation. Source: InterPro nickel-transporting ATPase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C4ZW28 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: B954C5027BFBAD99	FASTA	254	26,820
	10 20 30 40 50 60 MPQQIELRNI ALQAAQPLVH GVSLTLQRGR VLALVGGSGS GKSLTCAATL GILPAGVRQT 70 80 90 100 110 120 AGEILADGKP VSPCALRGIK IATIMQNPRS AFNPLHTMHT HARETCLALG KPADDATLTA 130 140 150 160 170 180 AIEAVGLENA ARVLKLYPFE MSGGMLQRMM IAMAVLCESP FIIADEPTTD LDVVAQARIL 190 200 210 220 230 240 DLLESIMQKQ APGMLLVTHD MGVVARLADD VAVMSDGKIV EQGDVETLFN APKHTVTRSL 250 VSAHLALYGM ELAS

References

[1]

"Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12." Ferenci T., Zhou Z., Betteridge T., Ren Y., Liu Y., Feng L., Reeves P.R., Wang L. J. Bacteriol. 191:4025-4029(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MC4100 / BW2952.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001396 Genomic DNA. Translation: ACR63889.1.
RefSeq	YP_002928366.1. NC_012759.1.
3D structure databases
ProteinModelPortal	C4ZW28.
SMR	C4ZW28. Positions 18-247.
ModBase	Search...
Protein-protein interaction databases
STRING	595496.BWG_3170.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACR63889; ACR63889; BWG_3170.
GeneID	7954379.
KEGG	ebw:BWG_3170.
PATRIC	18275941. VBIEscCol60876_3461.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0444.
KO	K15587.
OMA	DDVAVMD.
ProtClustDB	PRK10418.
Enzyme and pathway databases
BioCyc	ECOL595496:GI18-2347-MONOMER.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR015857. ABC_transpr_NikD. IPR014138. Nickel_NikD. [Graphical view]
Pfam	PF00005. ABC_tran. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
TIGRFAMs	TIGR02770. nickel_nikD. 1 hit.
PROSITE	PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. PS51247. NIKD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C4ZW28_ECOBW

Accession

Primary (citable) accession number: C4ZW28

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)