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C4ZSA5 (C4ZSA5_ECOBW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:yoeB EMBL ACR65670.1
Ordered Locus Names:BWG_1807 EMBL ACR65670.1
OrganismEscherichia coli (strain K12 / MC4100 / BW2952) [Complete proteome] [HAMAP] EMBL ACR65670.1
Taxonomic identifier595496 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length84 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4BYB
Complete proteome
Gene Ontology (GO)
   Biological_processRNA catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionendonuclease activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C4ZSA5 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: C043381C56DC2939

FASTA8410,216
        10         20         30         40         50         60 
MKLIWSEESW DDYLYWQETD KRIVKKINEL IKDTRRTPFE GKGKPEPLKH NLSGFWSRRI 

        70         80 
TEEHRLVYAV TDDSLLIAAC RYHY 

« Hide

References

« Hide 'large scale' references
[1]"Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12."
Ferenci T., Zhou Z., Betteridge T., Ren Y., Liu Y., Feng L., Reeves P.R., Wang L.
J. Bacteriol. 191:4025-4029(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MC4100 / BW2952.
[2]"YoeB-ribosome structure: a canonical RNase that requires the ribosome for its specific activity."
Feng S., Chen Y., Kamada K., Wang H., Tang K., Wang M., Gao Y.G.
Nucleic Acids Res. 41:9549-9556(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.35 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001396 Genomic DNA. Translation: ACR65670.1.
RefSeqYP_002927003.1. NC_012759.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BYBX-ray3.35Y/Z1-84[»]
ProteinModelPortalC4ZSA5.
SMRC4ZSA5. Positions 1-84.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING595496.BWG_1807.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR65670; ACR65670; BWG_1807.
GeneID7954860.
KEGGebw:BWG_1807.
PATRIC18272919. VBIEscCol60876_1984.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4115.
HOGENOMHOG000216470.
OMASWTDEAW.
OrthoDBEOG6KWZ5K.

Enzyme and pathway databases

BioCycECOL595496:GI18-1871-MONOMER.

Family and domain databases

InterProIPR009614. Addiction_module_toxin_Txe/Yoe.
[Graphical view]
PfamPF06769. Plasmid_Txe. 1 hit.
[Graphical view]
TIGRFAMsTIGR02116. toxin_Txe_YoeB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC4ZSA5_ECOBW
AccessionPrimary (citable) accession number: C4ZSA5
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)