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C4XSR3 (C4XSR3_DESMR) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
C4XSR3 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 61774EB86FBFD80C

FASTA44147,550
        10         20         30         40         50         60 
MNTTDKAQEL QALRDRYVPK GHPNATPFFV ESAKGALLRD VTGREFIDFV GGIGVLNVGH 

        70         80         90        100        110        120 
CHPKVVAAVK DQAGRYLHTC SMVTMYEPYV QLAARLSEAA PGDFEKKAMF VNSGSEAVEN 

       130        140        150        160        170        180 
AVKIARCHTG RAGVVSMKNA FHGRTLLAMS LTSKVKPYKF GFGPLAPEVY QYPNYAYCYR 

       190        200        210        220        230        240 
CPLGLTYPKC GVACADKLRE FFIATAAAEN IACIIAEPVQ GEGGFVVPPK EFFEKLRAIC 

       250        260        270        280        290        300 
DEYGIVFIAD EIQSGFGRTS KLFAMEHFGV APDLMTVAKS MGGGLPLAGV VGKAEIMDAV 

       310        320        330        340        350        360 
APGGIGGTYG GNPLACRAGL AVMDIFEQDN LLAKAERLGN VVKRRFAAFK KQYQLIGDER 

       370        380        390        400        410        420 
GLGAMRALEF VSDRATKAPC PEAAKGVAKF CQDNGLLVLS CGNFGNCIRV LMPLVITRDQ 

       430        440 
LDRGLDIMEE GIREVSKSLG K 

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References

[1]"Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria."
Nakazawa H., Arakaki A., Narita-Yamada S., Yashiro I., Jinno K., Aoki N., Tsuruyama A., Okamura Y., Tanikawa S., Fujita N., Takeyama H., Matsunaga T.
Genome Res. 19:1801-1808(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700980 / DSM 13731 / RS-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010904 Genomic DNA. Translation: BAH75755.1.
RefSeqYP_002953641.1. NC_012796.1.

3D structure databases

ProteinModelPortalC4XSR3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING573370.DMR_22640.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH75755; BAH75755; DMR_22640.
GeneID7983008.
KEGGdma:DMR_22640.
PATRIC21750819. VBIDesMag26496_2177.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMANSFTHTA.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycDMAG573370:GHJL-2289-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC4XSR3_DESMR
AccessionPrimary (citable) accession number: C4XSR3
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)