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Protein

Superoxide dismutase

Gene

sodB

Organism
Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi63Divalent metal cationUniRule annotation1
Metal bindingi115Divalent metal cationUniRule annotation1
Metal bindingi197Divalent metal cationUniRule annotation1
Metal bindingi201Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:DMR_42280Imported
OrganismiDesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1)Imported
Taxonomic identifieri573370 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000009071 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi573370.DMR_42280

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 123Sod_Fe_NInterPro annotationAdd BLAST85
Domaini129 – 230Sod_Fe_CInterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiYLHSIFW
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
IPR006311 TAT_signal
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit
PS51318 TAT, 1 hit

Sequencei

Sequence statusi: Complete.

C4XQ20-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSPLTVSRR QALRLVAGTG LFFMAGGMLR PSSAAAAAFE APKLPYAENA
60 70 80 90 100
LEPVISARTV SFHYGKHTLG YFDNANKLVA DTPLAGQPLE KVFLEAAKDQ
110 120 130 140 150
KLVGLFRNAA QAWNHVFYWN GLSAAGGKPS AKLQKAIDTS FGGQEALNKA
160 170 180 190 200
LAEAAVAQFG SGWAWLVADP AGKLSVVKTG NADNPLQEGL KPLWVIDVWE
210 220 230
HAYYLDYQNR RAEYVKGVLE KLVNWEFAAQ NLG
Length:233
Mass (Da):25,234
Last modified:July 28, 2009 - v1
Checksum:i24DA0CA1377107F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010904 Genomic DNA Translation: BAH77719.1
RefSeqiWP_015862844.1, NC_012796.1

Genome annotation databases

EnsemblBacteriaiBAH77719; BAH77719; DMR_42280
KEGGidma:DMR_42280

Similar proteinsi

Entry informationi

Entry nameiC4XQ20_DESMR
AccessioniPrimary (citable) accession number: C4XQ20
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: March 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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