C4XN01 (C4XN01_DESMR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
NAD-dependent epimerase/dehydratase family protein EMBL BAH77304.1

Gene names

Ordered Locus Names:

DMR_38130 EMBL BAH77304.1

Organism

Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) [Complete proteome] [HAMAP] EMBL BAH77304.1

Taxonomic identifier

573370 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › Desulfovibrio magneticus

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cellular metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro coenzyme binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C4XN01 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 4F343B0EB8FD0B2B	FASTA	355	39,560
	10 20 30 40 50 60 MQTMLVTGGA GFVGSNLAVA FKRKYPERTV IVLDNLKRRG SEFNVPRLVA EGIRFIHGDI 70 80 90 100 110 120 RNPEDMEFDD KIDVLLECSA EPSVLAGFGG SPKYLINTNL TGTINCLEVA RKNAADVVFL 130 140 150 160 170 180 STSRVYPYDP INAIGLREEE SRFVWQAGDG PRGWSEAGVD IDFDLNGPKS MYGATKLCSE 190 200 210 220 230 240 FVLREYEAMY GVRSVINRCG VIAGPWQFGK VDQGVFSLWV QAHYFKRKLS YIGFGGLGKQ 250 260 270 280 290 300 VRDLLHIDDL FDLLDLQLAD LEKAKGKVYN VGGGRETSLS LLETTRLCEQ LTGNAIEIRR 310 320 330 340 350 DPVNRPADLA IYIGDNRRVT ADYGWKPKRS AETVLTDLFD WVRDNEASLR TLSGL

References

[1]

"Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria." Nakazawa H., Arakaki A., Narita-Yamada S., Yashiro I., Jinno K., Aoki N., Tsuruyama A., Okamura Y., Tanikawa S., Fujita N., Takeyama H., Matsunaga T. Genome Res. 19:1801-1808(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700980 / DSM 13731 / RS-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP010904 Genomic DNA. Translation: BAH77304.1.
RefSeq	YP_002955190.1. NC_012796.1.
3D structure databases
ProteinModelPortal	C4XN01.
ModBase	Search...
Protein-protein interaction databases
STRING	573370.DMR_38130.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAH77304; BAH77304; DMR_38130.
GeneID	7981051.
KEGG	dma:DMR_38130.
PATRIC	21753677. VBIDesMag26496_3578.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0451.
HOGENOM	HOG000167994.
KO	K12454.
ProtClustDB	CLSK918665.
Enzyme and pathway databases
BioCyc	DMAG573370:GHJL-3162-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR001509. Epimerase_deHydtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Pfam	PF01370. Epimerase. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C4XN01_DESMR

Accession

Primary (citable) accession number: C4XN01

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)