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Protein
Submitted name:

Aldehyde ferredoxin oxidoreductase family protein

Gene

DMR_29360

Organism
Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. electron carrier activity Source: InterPro
  2. iron-sulfur cluster binding Source: InterPro
  3. oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciDMAG573370:GHJL-2967-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aldehyde ferredoxin oxidoreductase family proteinImported
Gene namesi
Ordered Locus Names:DMR_29360Imported
OrganismiDesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1)Imported
Taxonomic identifieri573370 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000009071: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi573370.DMR_29360.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2414.
HOGENOMiHOG000014651.
KOiK03738.
OMAiHIGTRFA.
OrthoDBiEOG6GTZDW.

Family and domain databases

Gene3Di1.10.599.10. 1 hit.
3.60.9.10. 1 hit.
InterProiIPR013985. Ald_Fedxn_OxRdtase_3.
IPR013983. Ald_Fedxn_OxRdtase_N.
IPR001203. OxRdtase_Ald_Fedxn_C.
[Graphical view]
PfamiPF01314. AFOR_C. 1 hit.
PF02730. AFOR_N. 1 hit.
[Graphical view]
SMARTiSM00790. AFOR_N. 1 hit.
[Graphical view]
SUPFAMiSSF48310. SSF48310. 2 hits.
SSF56228. SSF56228. 1 hit.

Sequencei

Sequence statusi: Complete.

C4XHQ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVCGWNRCIL RVDLSEKTVQ SIPLSEELLE KYLGGMGLAD KIIWDYILEK
60 70 80 90 100
DIRAGFDPLS PDNIFVIAMG PLTGLSTQGG RGIYQYISPV TGHLGGGSGG
110 120 130 140 150
GFVHAMLKQA GYDALVITGK ADQPVYLWID DDSVSIKDAS ELWGLGAHQT
160 170 180 190 200
VSTLKKQHGE VCSVVIGPAG ENLVRHATAM IDGFKSAGGK CGTGAVLGSK
210 220 230 240 250
NLKAIVVRGK KGVNVADPKA FLENDADFRN AIKENSAWPR FALWLAYFHT
260 270 280 290 300
TPFKPRLAEH IYDYAVRLEA CWNCHMACCG YHEQSRGKYP TRGTGPEIAN
310 320 330 340 350
QESFSALGVN DLEALNYYSD LLNDYGIDWK EGPGDIGIVM QLYKDGVLSA
360 370 380 390 400
KDTDGLELDS GDGKIIEEMI HWMAKRERIG NLVAEGKMNI ARLFPEARKY
410 420 430 440 450
DNTVRGTTGY GKDDPRTDRR NIGPAVMCHF TPYRGACLET WGWQSIGLAD
460 470 480 490 500
FSWEFPGKEG LRSGRGYTRE EAAEIVKEVV GADDHAMFSK GEPKGWCKLN
510 520 530 540 550
VRIGNWVVAN ESLILCRRIA CIVDNNITRA GISARMLSTA TGKEFTTESI
560 570 580 590 600
ERIGERIFNL QRMIDARLGI TRTQDKFPEY FYQPLGDGMG GLTEEDEKVI
610 620 630 640 650
HEEMDYYYSL RGWDLETGQP TKEKAEELGL AIEWTALQKD GPYKDWEGPP
660
LAGVSRGQRA AS
Length:662
Mass (Da):73,162
Last modified:July 28, 2009 - v1
Checksum:i87FF64B8D938B140
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010904 Genomic DNA. Translation: BAH76427.1.
RefSeqiYP_002954313.1. NC_012796.1.

Genome annotation databases

EnsemblBacteriaiBAH76427; BAH76427; DMR_29360.
GeneIDi7979710.
KEGGidma:DMR_29360.
PATRICi21752151. VBIDesMag26496_2837.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010904 Genomic DNA. Translation: BAH76427.1.
RefSeqiYP_002954313.1. NC_012796.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi573370.DMR_29360.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAH76427; BAH76427; DMR_29360.
GeneIDi7979710.
KEGGidma:DMR_29360.
PATRICi21752151. VBIDesMag26496_2837.

Phylogenomic databases

eggNOGiCOG2414.
HOGENOMiHOG000014651.
KOiK03738.
OMAiHIGTRFA.
OrthoDBiEOG6GTZDW.

Enzyme and pathway databases

BioCyciDMAG573370:GHJL-2967-MONOMER.

Family and domain databases

Gene3Di1.10.599.10. 1 hit.
3.60.9.10. 1 hit.
InterProiIPR013985. Ald_Fedxn_OxRdtase_3.
IPR013983. Ald_Fedxn_OxRdtase_N.
IPR001203. OxRdtase_Ald_Fedxn_C.
[Graphical view]
PfamiPF01314. AFOR_C. 1 hit.
PF02730. AFOR_N. 1 hit.
[Graphical view]
SMARTiSM00790. AFOR_N. 1 hit.
[Graphical view]
SUPFAMiSSF48310. SSF48310. 2 hits.
SSF56228. SSF56228. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria."
    Nakazawa H., Arakaki A., Narita-Yamada S., Yashiro I., Jinno K., Aoki N., Tsuruyama A., Okamura Y., Tanikawa S., Fujita N., Takeyama H., Matsunaga T.
    Genome Res. 19:1801-1808(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700980 / DSM 13731 / RS-1Imported.

Entry informationi

Entry nameiC4XHQ3_DESMR
AccessioniPrimary (citable) accession number: C4XHQ3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: March 4, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.