Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C4XHQ3 (C4XHQ3_DESMR) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:DMR_29360 EMBL BAH76427.1
OrganismDesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) [Complete proteome] [HAMAP] EMBL BAH76427.1
Taxonomic identifier573370 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

Protein attributes

Sequence length662 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C4XHQ3 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 87FF64B8D938B140

FASTA66273,162
        10         20         30         40         50         60 
MVCGWNRCIL RVDLSEKTVQ SIPLSEELLE KYLGGMGLAD KIIWDYILEK DIRAGFDPLS 

        70         80         90        100        110        120 
PDNIFVIAMG PLTGLSTQGG RGIYQYISPV TGHLGGGSGG GFVHAMLKQA GYDALVITGK 

       130        140        150        160        170        180 
ADQPVYLWID DDSVSIKDAS ELWGLGAHQT VSTLKKQHGE VCSVVIGPAG ENLVRHATAM 

       190        200        210        220        230        240 
IDGFKSAGGK CGTGAVLGSK NLKAIVVRGK KGVNVADPKA FLENDADFRN AIKENSAWPR 

       250        260        270        280        290        300 
FALWLAYFHT TPFKPRLAEH IYDYAVRLEA CWNCHMACCG YHEQSRGKYP TRGTGPEIAN 

       310        320        330        340        350        360 
QESFSALGVN DLEALNYYSD LLNDYGIDWK EGPGDIGIVM QLYKDGVLSA KDTDGLELDS 

       370        380        390        400        410        420 
GDGKIIEEMI HWMAKRERIG NLVAEGKMNI ARLFPEARKY DNTVRGTTGY GKDDPRTDRR 

       430        440        450        460        470        480 
NIGPAVMCHF TPYRGACLET WGWQSIGLAD FSWEFPGKEG LRSGRGYTRE EAAEIVKEVV 

       490        500        510        520        530        540 
GADDHAMFSK GEPKGWCKLN VRIGNWVVAN ESLILCRRIA CIVDNNITRA GISARMLSTA 

       550        560        570        580        590        600 
TGKEFTTESI ERIGERIFNL QRMIDARLGI TRTQDKFPEY FYQPLGDGMG GLTEEDEKVI 

       610        620        630        640        650        660 
HEEMDYYYSL RGWDLETGQP TKEKAEELGL AIEWTALQKD GPYKDWEGPP LAGVSRGQRA 


AS 

« Hide

References

[1]"Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria."
Nakazawa H., Arakaki A., Narita-Yamada S., Yashiro I., Jinno K., Aoki N., Tsuruyama A., Okamura Y., Tanikawa S., Fujita N., Takeyama H., Matsunaga T.
Genome Res. 19:1801-1808(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700980 / DSM 13731 / RS-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010904 Genomic DNA. Translation: BAH76427.1.
RefSeqYP_002954313.1. NC_012796.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING573370.DMR_29360.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH76427; BAH76427; DMR_29360.
GeneID7979710.
KEGGdma:DMR_29360.
PATRIC21752151. VBIDesMag26496_2837.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2414.
HOGENOMHOG000014651.
KOK03738.
OMAHIGTRFA.
OrthoDBEOG6GTZDW.

Enzyme and pathway databases

BioCycDMAG573370:GHJL-2967-MONOMER.

Family and domain databases

Gene3D1.10.599.10. 1 hit.
3.60.9.10. 1 hit.
InterProIPR013985. Ald_Fedxn_OxRdtase_3.
IPR013983. Ald_Fedxn_OxRdtase_N.
IPR001203. OxRdtase_Ald_Fedxn_C.
[Graphical view]
PfamPF01314. AFOR_C. 1 hit.
PF02730. AFOR_N. 1 hit.
[Graphical view]
SMARTSM00790. AFOR_N. 1 hit.
[Graphical view]
SUPFAMSSF48310. SSF48310. 2 hits.
SSF56228. SSF56228. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC4XHQ3_DESMR
AccessionPrimary (citable) accession number: C4XHQ3
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)