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C4XH10 (C4XH10_DESMR) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length383 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
C4XH10 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: F21089CA0C891D98

FASTA38341,109
        10         20         30         40         50         60 
MEKTVFWIEG DGIGPDVWKA GRPVLDAAVD KAYGGARKLV WKELLAGEKA FKEVGEYLPQ 

        70         80         90        100        110        120 
ATVEALTTAE LAFKGPLGTP VGGGFRSLNV TLRQVLDLYA CIRPIRYFQG IESPVKRPDL 

       130        140        150        160        170        180 
VDMIIFRENT EDVYAGIEYA TGTPEAKRLI AFLRDELGAK VDETAGIGIK PITPAGSKRL 

       190        200        210        220        230        240 
VRKAIQHAVD HKKPSVTLVH KGNIMKYTEG AFRAFGYEVA AQEFAAQCMT EQDAAAGGTK 

       250        260        270        280        290        300 
PIVVKDRIAD NMFQVALMRP QDYSVIATTN LNGDYISDAL AAQVGGLGLA PGVNMSEKLA 

       310        320        330        340        350        360 
FFEPTHGTAP GIAGKDKANP GSLILSGAML LEHLGWHEAA KLIHDSMDKT ISEKKVTVDL 

       370        380 
ADQIPGATTI GCAAFGELLA KNL 

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References

[1]"Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria."
Nakazawa H., Arakaki A., Narita-Yamada S., Yashiro I., Jinno K., Aoki N., Tsuruyama A., Okamura Y., Tanikawa S., Fujita N., Takeyama H., Matsunaga T.
Genome Res. 19:1801-1808(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700980 / DSM 13731 / RS-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010904 Genomic DNA. Translation: BAH76313.1.
RefSeqYP_002954199.1. NC_012796.1.

3D structure databases

ProteinModelPortalC4XH10.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING573370.DMR_28220.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH76313; BAH76313; DMR_28220.
GeneID7982423.
KEGGdma:DMR_28220.
PATRIC21751945. VBIDesMag26496_2736.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0538.
HOGENOMHOG000021113.
KOK00031.
OMAFRDWGYE.
OrthoDBEOG6SNDTP.
ProtClustDBCLSK704645.

Enzyme and pathway databases

BioCycDMAG573370:GHJL-2851-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC4XH10_DESMR
AccessionPrimary (citable) accession number: C4XH10
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: November 13, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)