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C4SS50 (C4SS50_YERFR) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:yfred0001_24160 EMBL EEQ13988.1
OrganismYersinia frederiksenii ATCC 33641 EMBL EEQ13988.1
Taxonomic identifier349966 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length168 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Gene Ontology (GO)
   Cellular_componentperiplasmic space

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C4SS50 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: A3A13E6D84F3B896

FASTA16819,062
        10         20         30         40         50         60 
MMRKVTKVST LIMASMLVLG SQAAFAVDKT GPNDGWCHGD GMMMNKKDGR GHHNMFDGVN 

        70         80         90        100        110        120 
LTEQQRQQMR DLMRQSRQGQ PRMDIADREA MHKLITADKF DEAAVRAQAE KMSKDQVDRQ 

       130        140        150        160 
VEMAKVRNQM FNLLTPEQKA ALNQKHQQRI EKMRQVPAPA AQPASAQK 

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References

[1]"Annotation of the Yersinia frederiksenii ATCC 33641 genome."
Read T.D., Akmal A., Bishop-Lilly K., Chen P.E., Cook C., Kiley M.P., Lentz S., Mateczun A., Nagarajan N., Nolan N., Osborne B.I., Pop M., Sozhamannan S., Stewart A.C., Sulakvelidze A., Thomason B., Willner K., Zwick M.E.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 33641 EMBL EEQ13988.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AALE02000018 Genomic DNA. Translation: EEQ13988.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEEQ13988; EEQ13988; yfred0001_24160.
PATRIC26377794. VBIYerFre50381_3099.

Family and domain databases

InterProIPR012899. LTXXQ.
[Graphical view]
PfamPF07813. LTXXQ. 1 hit.
[Graphical view]
PIRSFPIRSF034445. CpxP_Spy. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC4SS50_YERFR
AccessionPrimary (citable) accession number: C4SS50
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)