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C4R3L1 (C4R3L1_PICPG) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins, cleaves at the C ter EMBL CAY70048.1
Gene names
Ordered Locus Names:PAS_chr3_0117 EMBL CAY70048.1
OrganismKomagataella pastoris (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris) [Reference proteome]
Taxonomic identifier644223 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Komagataella ›

Protein attributes

Sequence length1280 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains USP domain. SAAS SAAS001394

Ontologies

Keywords
   Molecular functionHydrolase
Protease EMBL CAY70048.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processubiquitin-dependent protein catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpeptidase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C4R3L1 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: BB82033A3BE4A38E

FASTA1,280147,077
        10         20         30         40         50         60 
MPDQVPSAST NVNNPFAQLE AYDFSKSKIF KTSNRLIDDI KNSVLFLEQF SILNLPAVDY 

        70         80         90        100        110        120 
ATQLSLQYQN RQINESFKLV LLNNQLDFAP TVSTEQLPNG TRTVFRGLIV QDTVHGIPIS 

       130        140        150        160        170        180 
DIPIYHCRIL FKSLENEILC SKHQFFHFSD DSLSPSDRSD LVTDYAKISK GELTDCEDDL 

       190        200        210        220        230        240 
KPSIVQSCPK LLDSTNYICR KCYKVLRIEI FEKDLSNEEY KQFELNEIQF RYSKTVSADP 

       250        260        270        280        290        300 
SLNISNENDV NKIPSQSECL WTLFKVLRGP LSRDPEELEV KTLDVNHKIL NIHLDMDIFE 

       310        320        330        340        350        360 
KCLFFHKSAD GSYLTPPLFS EYGVFENLVR ESYIRKLLEV VYLGTICPNN PGLKRLNQFA 

       370        380        390        400        410        420 
QAYWFNDTGS KIFHFLKEFD STAAIEWFGG LRYDVLERYN PALTTLVSAN YFNNKLICGS 

       430        440        450        460        470        480 
YSLLCESDPQ NTPKYFDALR DIGLLRQAPV VQEFVAKEAS KNVFSFRDTM RNYQILGIDT 

       490        500        510        520        530        540 
SSADFPTLSD DEILKFYKYE LILANSESSY DRLRNALSSI ADYRKSEALQ NYLRIEPIHN 

       550        560        570        580        590        600 
IDQAYKHFDT PQSIEDDVLI TAFQFKKDDF PQAVALYDRA LLTIAIQRKS LFLWSYITHN 

       610        620        630        640        650        660 
LDYLFKVIVA SSSKTITGVE DAYKYLGCDP LATDFQVVTI FQERLIKDPG IDVILFFYSL 

       670        680        690        700        710        720 
VVIEKSRSSK LIGKFLQNGV VDASFLPLES SPVGLNNIGN TCYLNSLLQY YFVIKPLRTA 

       730        740        750        760        770        780 
IQNFKDILPS SEEEFNSIED YSKRRIGGRT VGYKETERSF QFVYQLRDLF DELIHSRRIA 

       790        800        810        820        830        840 
ITPTKELAYL AFSPSTDEVQ FHLPEVQKPR PSITESETGM SDAPVPELSP VAMDWSSSIA 

       850        860        870        880        890        900 
YPEPSSSHHE ESAALNSPDE SSELIHSPTK RKLSPQPSTE DLNEIDTKVS VTNAEPPTTT 

       910        920        930        940        950        960 
LPKRATTAVA LIGNDQLENA LELGRQQDVT ECIENVLFQL ESASKPTSLD SDDQEQNDLV 

       970        980        990       1000       1010       1020 
KELFYGRTKQ ILQPVDKETK ENITDSSVRT KVERFVSLLV NIGDHPKDLY DALDTYFTED 

      1030       1040       1050       1060       1070       1080 
LIDLDDGQVK RSLTITELPK FLQIQVQRVQ FDRERGIPFK ALDPLPFHEK LYMDRYLETD 

      1090       1100       1110       1120       1130       1140 
NEELILKRKE IFQWKNEISK LNRRKDEILV PSSHSMTPRN ALIATKEFLE AQKELPGDIQ 

      1150       1160       1170       1180       1190       1200 
ATESTLITLQ KEIDILNSEL QTINSRLSEL EEKCQHQFDQ FKNTGYSIFA IFIHRGEASY 

      1210       1220       1230       1240       1250       1260 
GHYWVYIRDP TRNIYRKYND ETITEVPISE VFNFSESNTA TPYFLVFVRE DLEDEVEPLK 

      1270       1280 
RELDSSPTTE DFRISVEELD

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References

[1]"Genome sequence of the recombinant protein production host Pichia pastoris."
De Schutter K., Lin Y.-C., Tiels P., Van Hecke A., Glinka S., Weber-Lehmann J., Rouze P., Van de Peer Y., Callewaert N.
Nat. Biotechnol. 27:561-566(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GS115 / ATCC 20864.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FN392321 Genomic DNA. Translation: CAY70048.1.
RefSeqXP_002492326.1. XM_002492281.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING644223.PAS_chr3_0117.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiCAY70048; CAY70048; PAS_chr3_0117.
GeneID8199397.
KEGGppa:PAS_chr3_0117.

Phylogenomic databases

eggNOGNOG275561.
HOGENOMHOG000094458.
KOK11849.
OrthoDBEOG7327X3.

Family and domain databases

InterProIPR018200. Pept_C19ubi-hydrolase_C_CS.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
IPR025305. UCH_repeat_domain.
[Graphical view]
PfamPF13446. RPT. 3 hits.
PF00443. UCH. 1 hit.
[Graphical view]
PROSITEPS00972. UCH_2_1. 1 hit.
PS50235. UCH_2_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC4R3L1_PICPG
AccessionPrimary (citable) accession number: C4R3L1
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: April 16, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info