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Protein
Submitted name:

RNA polymerase II subunit B32

Gene

PAS_chr2-2_0104

Organism
Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase II subunit B32Imported
Gene namesi
Ordered Locus Names:PAS_chr2-2_0104Imported
OrganismiKomagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)Imported
Taxonomic identifieri644223 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesPhaffomycetaceaeKomagataella
Proteomesi
  • UP000000314 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi644223.XP_002492103.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5X4ZX-ray7.80D/P1-186[»]
5X50X-ray4.29D1-186[»]
5X51X-ray7.00D/P1-186[»]
5XOGX-ray3.00D1-186[»]
5XONelectron microscopy3.83D1-186[»]
SMRiC4R2U9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini42 – 185RPOL4cInterPro annotationAdd BLAST144

Phylogenomic databases

eggNOGiKOG2351. Eukaryota.
COG5250. LUCA.
HOGENOMiHOG000195281.
InParanoidiC4R2U9.
KOiK03012.
OMAiGTLECED.
OrthoDBiEOG092C5NLC.

Family and domain databases

InterProiView protein in InterPro
IPR010997. HRDC-like.
IPR005574. RNA_pol_II_Rpb4.
IPR006590. RNA_pol_II_Rpb4_core.
PfamiView protein in Pfam
PF03874. RNA_pol_Rpb4. 1 hit.
SMARTiView protein in SMART
SM00657. RPOL4c. 1 hit.
SUPFAMiSSF47819. SSF47819. 1 hit.

Sequencei

Sequence statusi: Complete.

C4R2U9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVSTSTVGA RRRRAKQQVD DEENATLLRL GPEFALKQYD HDGNEHDLIA
60 70 80 90 100
LSLSESRLLI REALKARSRA RNGGVDIESS NGEIDDDELA KVTSGAVANG
110 120 130 140 150
VVKKTLDYLN TFARFKDEET CTAVDQLLHN SSDCSVLHPF EIAQLSSLGC
160 170 180
EDVDEAITLI PSLAAKKEVN LQRILDELNR LEDPYK
Length:186
Mass (Da):20,596
Last modified:July 7, 2009 - v1
Checksum:iD38D53415F6C92A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN392320 Genomic DNA. Translation: CAY69823.1.
RefSeqiXP_002492103.1. XM_002492058.1.

Genome annotation databases

EnsemblFungiiCAY69823; CAY69823; PAS_chr2-2_0104.
GeneIDi8199208.
KEGGippa:PAS_chr2-2_0104.

Similar proteinsi

Entry informationi

Entry nameiC4R2U9_KOMPG
AccessioniPrimary (citable) accession number: C4R2U9
Entry historyiIntegrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: October 25, 2017
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported