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Protein
Submitted name:

RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III

Gene

PAS_chr2-2_0434

Organism
Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase subunit ABC23, common to RNA polymerases I, II, and IIIImported
Gene namesi
Ordered Locus Names:PAS_chr2-2_0434Imported
OrganismiKomagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)Imported
Taxonomic identifieri644223 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesPhaffomycetaceaeKomagataella
Proteomesi
  • UP000000314 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi644223.XP_002491755.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5X4ZX-ray7.80F/R1-155[»]
5X50X-ray4.29F1-155[»]
5X51X-ray7.00F/R1-155[»]
5XOGX-ray3.00F1-155[»]
5XONelectron microscopy3.83F1-155[»]
SMRiC4R1V1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3405. Eukaryota.
COG1758. LUCA.
HOGENOMiHOG000225272.
InParanoidiC4R1V1.
KOiK03014.
OMAiINGGFGP.
OrthoDBiEOG092C5A9A.

Family and domain databases

Gene3Di3.90.940.10. 1 hit.
HAMAPiMF_00192. RNApol_arch_K. 1 hit.
InterProiView protein in InterPro
IPR020708. DNA-dir_RNA_polK_14-18kDa_CS.
IPR006110. Pol_omega/K/RPB6.
IPR012293. RNAP_RPB6_omega.
IPR028363. RPB6.
IPR036161. RPB6/omega_like_sf.
IPR006111. RpoK/Rpb6.
PfamiView protein in Pfam
PF01192. RNA_pol_Rpb6. 1 hit.
PIRSFiPIRSF500154. RPB6. 1 hit.
PIRSF000778. RpoK/RPB6. 1 hit.
SMARTiView protein in SMART
SM01409. RNA_pol_Rpb6. 1 hit.
SUPFAMiSSF63562. SSF63562. 1 hit.
PROSITEiView protein in PROSITE
PS01111. RNA_POL_K_14KD. 1 hit.

Sequencei

Sequence statusi: Complete.

C4R1V1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEDEAFNEQ TENFENFEDE HFSDDNFEDR STQPEDYAVG VTADGRQIIN
60 70 80 90 100
GDGIQEVNGT IKAHRKRSNK ELAILKEERT TTPYLTKYER ARILGTRALQ
110 120 130 140 150
ISMNAPVLVD IEGETDPLQI AMKELSQRKI PLVIRRYLPD GSYEDWGCDE

LIVDN
Length:155
Mass (Da):17,784
Last modified:July 7, 2009 - v1
Checksum:iD7D9FB883CB39666
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN392320 Genomic DNA. Translation: CAY69475.1.
RefSeqiXP_002491755.1. XM_002491710.1.

Genome annotation databases

EnsemblFungiiCAY69475; CAY69475; PAS_chr2-2_0434.
GeneIDi8199137.
KEGGippa:PAS_chr2-2_0434.

Similar proteinsi

Entry informationi

Entry nameiC4R1V1_KOMPG
AccessioniPrimary (citable) accession number: C4R1V1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: October 25, 2017
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported