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C4R0D8 (C4R0D8_PICPG) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PAS_chr2-1_0343 EMBL CAY68962.1
OrganismKomagataella pastoris (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris) [Reference proteome]
Taxonomic identifier644223 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeKomagataella

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
C4R0D8 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: 4F807AD9843B4F1C

FASTA49755,444
        10         20         30         40         50         60 
MTPIKTDLEA DRVTELETLL RPAVELIAQH IKDTDENDKP IGPYYPNPRD LYQSLKLEAD 

        70         80         90        100        110        120 
FNGGGKDDEL VIQTVKKVLD SSVNTWNAGF MDKLYASTNV IGLVSDLLLS ALNTNSHVFT 

       130        140        150        160        170        180 
VSPAVTIIEK YTARQYAGLF GFLGPRAGGL TFPGGSWSNV TSLQMARSSL YPDTKVKGNG 

       190        200        210        220        230        240 
NHHFAVFASS HSHYSVEKAC ILLGIGAENL FKCKVDKNGC MDVTDLRVNI EKSIAEGYTP 

       250        260        270        280        290        300 
LYINATAGTT VFGSYDSFED IHKIAKEYKC WFHIDGSWGG NVIFSDREKH KMKGSHLADS 

       310        320        330        340        350        360 
ITANPHKMLG VPCTCSFLLV PDVSIFQQAN SLNAPYLFHN KHEDDDENYD LADGTMGCGR 

       370        380        390        400        410        420 
RADSLKFYLS WLYYGSEGYK ERVDHAFSIA RYFTSKIVNR KGFKLVGSPE PACLQVCFYY 

       430        440        450        460        470        480 
NPKNDFENGS ENTNATRYIA TELHKHGKFL VDYSPNPDDV DNQHGEFFRV VFNSPILDDK 

       490 
TIDSLIDLIE QTGEEIV 

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References

[1]"Genome sequence of the recombinant protein production host Pichia pastoris."
De Schutter K., Lin Y.-C., Tiels P., Van Hecke A., Glinka S., Weber-Lehmann J., Rouze P., Van de Peer Y., Callewaert N.
Nat. Biotechnol. 27:561-566(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GS115 / ATCC 20864.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN392320 Genomic DNA. Translation: CAY68962.1.
RefSeqXP_002491242.1. XM_002491197.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING644223.PAS_chr2-1_0343.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiCAY68962; CAY68962; PAS_chr2-1_0343.
GeneID8199031.
KEGGppa:PAS_chr2-1_0343.

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000005382.
KOK01580.
OrthoDBEOG7380F0.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC4R0D8_PICPG
AccessionPrimary (citable) accession number: C4R0D8
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: January 22, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)