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Protein
Submitted name:

Pichia pastoris GS115 chromosome 2, complete sequence

Gene

PAS_chr2-1_0343

Organism
Komagataella pastoris (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Pichia pastoris GS115 chromosome 2, complete sequenceImported
Gene namesi
Ordered Locus Names:PAS_chr2-1_0343Imported
OrganismiKomagataella pastoris (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)Imported
Taxonomic identifieri644223 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesPhaffomycetaceaeKomagataella
ProteomesiUP000000314 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi644223.XP_002491242.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000005382.
InParanoidiC4R0D8.
KOiK01580.
OrthoDBiEOG7380F0.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

C4R0D8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTPIKTDLEA DRVTELETLL RPAVELIAQH IKDTDENDKP IGPYYPNPRD
60 70 80 90 100
LYQSLKLEAD FNGGGKDDEL VIQTVKKVLD SSVNTWNAGF MDKLYASTNV
110 120 130 140 150
IGLVSDLLLS ALNTNSHVFT VSPAVTIIEK YTARQYAGLF GFLGPRAGGL
160 170 180 190 200
TFPGGSWSNV TSLQMARSSL YPDTKVKGNG NHHFAVFASS HSHYSVEKAC
210 220 230 240 250
ILLGIGAENL FKCKVDKNGC MDVTDLRVNI EKSIAEGYTP LYINATAGTT
260 270 280 290 300
VFGSYDSFED IHKIAKEYKC WFHIDGSWGG NVIFSDREKH KMKGSHLADS
310 320 330 340 350
ITANPHKMLG VPCTCSFLLV PDVSIFQQAN SLNAPYLFHN KHEDDDENYD
360 370 380 390 400
LADGTMGCGR RADSLKFYLS WLYYGSEGYK ERVDHAFSIA RYFTSKIVNR
410 420 430 440 450
KGFKLVGSPE PACLQVCFYY NPKNDFENGS ENTNATRYIA TELHKHGKFL
460 470 480 490
VDYSPNPDDV DNQHGEFFRV VFNSPILDDK TIDSLIDLIE QTGEEIV
Length:497
Mass (Da):55,444
Last modified:July 7, 2009 - v1
Checksum:i4F807AD9843B4F1C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN392320 Genomic DNA. Translation: CAY68962.1.
RefSeqiXP_002491242.1. XM_002491197.1.

Genome annotation databases

EnsemblFungiiCAY68962; CAY68962; PAS_chr2-1_0343.
GeneIDi8199031.
KEGGippa:PAS_chr2-1_0343.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN392320 Genomic DNA. Translation: CAY68962.1.
RefSeqiXP_002491242.1. XM_002491197.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi644223.XP_002491242.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCAY68962; CAY68962; PAS_chr2-1_0343.
GeneIDi8199031.
KEGGippa:PAS_chr2-1_0343.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000005382.
InParanoidiC4R0D8.
KOiK01580.
OrthoDBiEOG7380F0.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GS115 / ATCC 20864Imported.

Entry informationi

Entry nameiC4R0D8_PICPG
AccessioniPrimary (citable) accession number: C4R0D8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: June 24, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.