C4QYE8 (C4QYE8_PICPG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
40S small ribosomal subunit EMBL CAY68271.1

Gene names

Ordered Locus Names:

PAS_chr1-4_0422

Organism

Pichia pastoris (strain GS115 / ATCC 20864) (Yeast) [Complete proteome]

Taxonomic identifier

644223 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Komagataella

Protein attributes

Sequence length	193 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S4P family. RuleBase RU003699 Contains 1 S4 RNA-binding domain. RuleBase RU003699

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003699
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C4QYE8 [UniParc]. Last modified July 7, 2009. Version 1. Checksum: 348CE26DDEA63892	FASTA	193	22,187
	10 20 30 40 50 60 MPRAPRTYSK TYSVPKTPYD SARFDQELKL AGEYGLKNKK EIYRIGFQLS KIRRAARDLL 70 80 90 100 110 120 TRDEKDPKRL FEGNALIRRL VRTGILSEEK RKLDYVLALK VEDFLERRLQ TQVFKLGLAK 130 140 150 160 170 180 SIHHARVLIS QRHIAVGKQI VTIPSFMVRL ESQKHIDFAS TSPYGGGRAG RVKRKNQAKS 190 SEGGAEEEEE DEE

References

[1]

"Genome sequence of the recombinant protein production host Pichia pastoris." De Schutter K., Lin Y.-C., Tiels P., Van Hecke A., Glinka S., Weber-Lehmann J., Rouze P., Van de Peer Y., Callewaert N. Nat. Biotechnol. 27:561-566(2009) [PubMed: 19465926] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GS115 / ATCC 20864.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN392319 Genomic DNA. Translation: CAY68271.1.
RefSeq	XP_002490552.1. XM_002490507.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C4QYE8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8197010.
GenomeReviews	Gene locus PAS_chr1-4_0422 in contig FN392319_GR.
KEGG	ppa:PAS_chr1-4_0422.
Phylogenomic databases
OrthoDB	EOG4Q886R.
Family and domain databases
InterPro	IPR022801. Ribosomal_S4/S9. IPR005710. Ribosomal_S4/S9_euk/arc. IPR001912. Ribosomal_S4/S9_N. IPR018079. Ribosomal_S4_CS. IPR002942. S4_RNA-bd. [Graphical view]
Gene3D	G3DSA:3.10.290.10. G3DSA:3.10.290.10. 1 hit.
KO	K02997.
PANTHER	PTHR11831. Ribosomal_S4. 1 hit.
Pfam	PF00163. Ribosomal_S4. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
TIGRFAMs	TIGR01018. RpsD_arch. 1 hit.
PROSITE	PS00632. RIBOSOMAL_S4. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C4QYE8_PICPG

Accession

Primary (citable) accession number: C4QYE8

Entry history

Integrated into UniProtKB/TrEMBL:	July 7, 2009
Last sequence update:	July 7, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)