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C4PRB0

- C4PRB0_CHLTJ

UniProt

C4PRB0 - C4PRB0_CHLTJ

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Protein

Serine hydroxymethyltransferase

Gene
glyA, JALI_4331
Organism
Chlamydia trachomatis serovar B (strain Jali20/OT)
Status
Unreviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism By similarity.UniRule annotation

Catalytic activityi

5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine.UniRule annotation

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei59 – 591Pyridoxal phosphate By similarityUniRule annotation
Binding sitei79 – 791Pyridoxal phosphate By similarityUniRule annotation
Binding sitei81 – 811Substrate By similarityUniRule annotation
Binding sitei88 – 881Substrate By similarityUniRule annotation
Binding sitei89 – 891Pyridoxal phosphate By similarityUniRule annotation
Binding sitei176 – 1761Substrate; via carbonyl oxygen By similarityUniRule annotation
Binding sitei232 – 2321Pyridoxal phosphate By similarityUniRule annotation
Binding sitei260 – 2601Pyridoxal phosphate By similarityUniRule annotation
Binding sitei288 – 2881Pyridoxal phosphate By similarityUniRule annotation
Binding sitei295 – 2951Pyridoxal phosphate By similarityUniRule annotation
Binding sitei319 – 3191Pyridoxal phosphate; via amide nitrogen and carbonyl oxygen By similarityUniRule annotation
Binding sitei419 – 4191Pyridoxal phosphate By similarityUniRule annotation

GO - Molecular functioni

  1. glycine hydroxymethyltransferase activity Source: UniProtKB-HAMAP
  2. methyltransferase activity Source: UniProtKB-KW
  3. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycine biosynthetic process from serine Source: UniProtKB-HAMAP
  2. tetrahydrofolate interconversion Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseImported, Transferase

Keywords - Biological processi

Amino-acid biosynthesisUniRule annotation, One-carbon metabolismUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciCTRA580049:GH1T-458-MONOMER.
UniPathwayiUPA00193.
UPA00288; UER01023.

Names & Taxonomyi

Protein namesi
Recommended name:
Serine hydroxymethyltransferaseUniRule annotation (EC:2.1.2.1UniRule annotation)
Short name:
SHMTUniRule annotation
Short name:
Serine methylaseUniRule annotation
Gene namesi
Name:glyAUniRule annotationImported
Ordered Locus Names:JALI_4331Imported
OrganismiChlamydia trachomatis serovar B (strain Jali20/OT)Imported
Taxonomic identifieri580049 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
ProteomesiUP000002053: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei289 – 2891N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Interactioni

Subunit structurei

Homodimer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi580049.JALI_4331.

Family & Domainsi

Sequence similaritiesi

Belongs to the SHMT family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0112.
HOGENOMiHOG000239404.
KOiK00600.
OMAiHLMLVDV.
OrthoDBiEOG6Z0QB2.

Family and domain databases

Gene3Di3.40.640.10. 2 hits.
3.90.1150.10. 1 hit.
HAMAPiMF_00051. SHMT.
InterProiIPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR001085. Ser_HO-MeTrfase.
IPR019798. Ser_HO-MeTrfase_PLP_BS.
[Graphical view]
PANTHERiPTHR11680. PTHR11680. 1 hit.
PfamiPF00464. SHMT. 2 hits.
[Graphical view]
PIRSFiPIRSF000412. SHMT. 1 hit.
SUPFAMiSSF53383. SSF53383. 2 hits.
PROSITEiPS00096. SHMT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C4PRB0-1 [UniParc]FASTAAdd to Basket

« Hide

MASLLDRYLR NISDKSQQNL ASVAYSASLD HLLHAFPSIG QSIVQELKSQ    50
RSRLKMIASE NFSSLSVQLA MGNLLTDKYC EGSPFKRFYS CCENVDAIEW 100
ECAETAKELF GAESAFVQPH SGADANLLAI MSIITQKIQS PAVQRLGYKT 150
INDLPEQEYE ALKAEMAQHK CLGPSLNSGG HLTHGTVRMN IMSKLMHCLP 200
YEVNLDTELF DYDEIAKIAK EHKPTVLIAG YSSYSRRLNF ATLKQIAEDC 250
GAVLWVDMAH FAGLVAGGVF VGEENPMPYA DIVTTTTHKT LRGPRGGLVL 300
AKKEYANTLN KACPLMMGGP LPHVIAAKAI ALKEAMTINF RKYAHKVVEN 350
ARTLAEVFQR NGLRLLTGGT DNHMLIIDLT SLGVPGRIAE DMLTSVGIAV 400
NRNTIPSDAS GQWKTSGIRL GTPALTTLGM GSAEMEEVAN IIVKVLRNIT 450
VRSNAESGSS KSEGELSEGI AQEARQRVAD LLGRFPLYPE IDLETLV 497
Length:497
Mass (Da):54,245
Last modified:July 7, 2009 - v1
Checksum:i73663EF9F07AA11F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM872308 Genomic DNA. Translation: CAX10887.1.
RefSeqiYP_002888053.1. NC_012686.1.

Genome annotation databases

EnsemblBacteriaiCAX10887; CAX10887; JALI_4331.
GeneIDi7882273.
KEGGictj:JALI_4331.
PATRICi20378430. VBIChlTra100303_0488.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM872308 Genomic DNA. Translation: CAX10887.1 .
RefSeqi YP_002888053.1. NC_012686.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 580049.JALI_4331.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAX10887 ; CAX10887 ; JALI_4331 .
GeneIDi 7882273.
KEGGi ctj:JALI_4331.
PATRICi 20378430. VBIChlTra100303_0488.

Phylogenomic databases

eggNOGi COG0112.
HOGENOMi HOG000239404.
KOi K00600.
OMAi HLMLVDV.
OrthoDBi EOG6Z0QB2.

Enzyme and pathway databases

UniPathwayi UPA00193 .
UPA00288 ; UER01023 .
BioCyci CTRA580049:GH1T-458-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 2 hits.
3.90.1150.10. 1 hit.
HAMAPi MF_00051. SHMT.
InterProi IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR001085. Ser_HO-MeTrfase.
IPR019798. Ser_HO-MeTrfase_PLP_BS.
[Graphical view ]
PANTHERi PTHR11680. PTHR11680. 1 hit.
Pfami PF00464. SHMT. 2 hits.
[Graphical view ]
PIRSFi PIRSF000412. SHMT. 1 hit.
SUPFAMi SSF53383. SSF53383. 2 hits.
PROSITEi PS00096. SHMT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Jali20/OT.

Entry informationi

Entry nameiC4PRB0_CHLTJ
AccessioniPrimary (citable) accession number: C4PRB0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: July 9, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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