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Protein
Submitted name:

Ubiquitin

Gene

EhUBI1

Organism
Entamoeba histolytica
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
UbiquitinImported
Submitted name:
Ubiquitin, putativeImported
Gene namesi
Name:EhUBI1Imported
ORF Names:EHI_083270Imported, EHI_083410Imported, EHI_156660Imported, EHI_178340Imported
OrganismiEntamoeba histolyticaImported
Taxonomic identifieri5759 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaArchamoebaeEntamoebidaeEntamoeba
ProteomesiUP000001926: Partially assembled WGS sequence

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GSWX-ray2.15A/B1-77[»]
4GU2X-ray1.35A1-77[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK02927.

Family and domain databases

InterProiIPR019956. Ubiquitin.
IPR000626. Ubiquitin-like.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
[Graphical view]
PfamiPF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSiPR00348. UBIQUITIN.
SMARTiSM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C4M760-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIFVKTLTG KTITLEVEPN DSIDAIKAKI QEKEGIPPDQ QRLIFAGKQL
60 70
EEGKTLSDYN IQKESTLHLV LRLRGGY
Length:77
Mass (Da):8,698
Last modified:July 7, 2009 - v1
Checksum:i6B702034246910A4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X98567 Genomic DNA. Translation: CAA67177.1.
DS571318 Genomic DNA. Translation: EAL44777.1.
DS571545 Genomic DNA. Translation: EAL45141.1.
DS571318 Genomic DNA. Translation: EAL49643.1.
DS571744 Genomic DNA. Translation: EAL49792.1.
PIRiS29238.
RefSeqiXP_650163.1. XM_645071.2.
XP_650527.1. XM_645435.2.
XP_655029.1. XM_649937.1.
XP_655179.1. XM_650087.2.

Genome annotation databases

EnsemblProtistsirna_EHI_083270-1; rna_EHI_083270-1; EHI_083270.
rna_EHI_083410-1; rna_EHI_083410-1; EHI_083410.
rna_EHI_156660-1; rna_EHI_156660-1; EHI_156660.
GeneIDi3404456.
3404829.
3409345.
3409499.
KEGGiehi:EHI_083270.
ehi:EHI_083410.
ehi:EHI_156660.
ehi:EHI_178340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X98567 Genomic DNA. Translation: CAA67177.1.
DS571318 Genomic DNA. Translation: EAL44777.1.
DS571545 Genomic DNA. Translation: EAL45141.1.
DS571318 Genomic DNA. Translation: EAL49643.1.
DS571744 Genomic DNA. Translation: EAL49792.1.
PIRiS29238.
RefSeqiXP_650163.1. XM_645071.2.
XP_650527.1. XM_645435.2.
XP_655029.1. XM_649937.1.
XP_655179.1. XM_650087.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GSWX-ray2.15A/B1-77[»]
4GU2X-ray1.35A1-77[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsirna_EHI_083270-1; rna_EHI_083270-1; EHI_083270.
rna_EHI_083410-1; rna_EHI_083410-1; EHI_083410.
rna_EHI_156660-1; rna_EHI_156660-1; EHI_156660.
GeneIDi3404456.
3404829.
3409345.
3409499.
KEGGiehi:EHI_083270.
ehi:EHI_083410.
ehi:EHI_156660.
ehi:EHI_178340.

Phylogenomic databases

KOiK02927.

Family and domain databases

InterProiIPR019956. Ubiquitin.
IPR000626. Ubiquitin-like.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
[Graphical view]
PfamiPF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSiPR00348. UBIQUITIN.
SMARTiSM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Ubiquitin of Entamoeba histolytica deviates in six amino acid residues from the consensus of all other known ubiquitins."
    Wostmann C., Tannich E., Bakker-Grunwald T.
    FEBS Lett. 308:54-58(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE.
  2. "Characterization of ubiquitin genes and -transcripts and demonstration of a ubiquitin-conjugating system in Entamoeba histolytica."
    Wostmann C., Liakopoulos D., Ciechanover A., Bakker-Grunwald T.
    Mol. Biochem. Parasitol. 82:81-90(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HM-1:IMSSImported.
  3. Bakker-Grunwald O.A.
    Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HM-1:IMSSImported.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 30459 / HM-1:IMSSImported.
  5. Lorenzi H., Amedeo P., Inman J., Schobel S., Caler E.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: ATCC 30459 / HM-1:IMSSImported.
  6. "Structural determinants of ubiquitin conjugation in Entamoeba histolytica."
    Bosch D.E., Siderovski D.P.
    J. Biol. Chem. 288:2290-2302(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.35 ANGSTROMS).

Entry informationi

Entry nameiC4M760_ENTHI
AccessioniPrimary (citable) accession number: C4M760
Secondary accession number(s): Q27935
Entry historyi
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: March 4, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.