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C4M760

- C4M760_ENTHI

UniProt

C4M760 - C4M760_ENTHI

Protein
Submitted name:

Ubiquitin

Gene

EhUBI1

Organism
Entamoeba histolytica
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Names & Taxonomyi

    Protein namesi
    Submitted name:
    UbiquitinImported
    Submitted name:
    Ubiquitin, putativeImported
    Gene namesi
    Name:EhUBI1Imported
    ORF Names:EHI_083270Imported, EHI_083410Imported, EHI_156660Imported, EHI_178340Imported
    OrganismiEntamoeba histolyticaImported
    Taxonomic identifieri5759 [NCBI]
    Taxonomic lineageiEukaryotaAmoebozoaArchamoebaeEntamoebidaeEntamoeba
    ProteomesiUP000001926: Partially assembled WGS sequence

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4GSWX-ray2.15A/B1-77[»]
    4GU2X-ray1.35A1-77[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK02927.

    Family and domain databases

    InterProiIPR019956. Ubiquitin.
    IPR000626. Ubiquitin-like.
    IPR029071. Ubiquitin-rel_dom.
    IPR019954. Ubiquitin_CS.
    [Graphical view]
    PfamiPF00240. ubiquitin. 1 hit.
    [Graphical view]
    PRINTSiPR00348. UBIQUITIN.
    SMARTiSM00213. UBQ. 1 hit.
    [Graphical view]
    SUPFAMiSSF54236. SSF54236. 1 hit.
    PROSITEiPS00299. UBIQUITIN_1. 1 hit.
    PS50053. UBIQUITIN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C4M760-1 [UniParc]FASTAAdd to Basket

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    MQIFVKTLTG KTITLEVEPN DSIDAIKAKI QEKEGIPPDQ QRLIFAGKQL   50
    EEGKTLSDYN IQKESTLHLV LRLRGGY 77
    Length:77
    Mass (Da):8,698
    Last modified:July 7, 2009 - v1
    Checksum:i6B702034246910A4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X98567 Genomic DNA. Translation: CAA67177.1.
    DS571318 Genomic DNA. Translation: EAL44777.1.
    DS571545 Genomic DNA. Translation: EAL45141.1.
    DS571318 Genomic DNA. Translation: EAL49643.1.
    DS571744 Genomic DNA. Translation: EAL49792.1.
    PIRiS29238.
    RefSeqiXP_650163.1. XM_645071.2.
    XP_650527.1. XM_645435.2.
    XP_655029.1. XM_649937.1.
    XP_655179.1. XM_650087.2.

    Genome annotation databases

    EnsemblProtistsirna_EHI_083270-1; rna_EHI_083270-1; EHI_083270.
    rna_EHI_083410-1; rna_EHI_083410-1; EHI_083410.
    rna_EHI_156660-1; rna_EHI_156660-1; EHI_156660.
    GeneIDi3404456.
    3404829.
    3409345.
    3409499.
    KEGGiehi:EHI_083270.
    ehi:EHI_083410.
    ehi:EHI_156660.
    ehi:EHI_178340.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X98567 Genomic DNA. Translation: CAA67177.1 .
    DS571318 Genomic DNA. Translation: EAL44777.1 .
    DS571545 Genomic DNA. Translation: EAL45141.1 .
    DS571318 Genomic DNA. Translation: EAL49643.1 .
    DS571744 Genomic DNA. Translation: EAL49792.1 .
    PIRi S29238.
    RefSeqi XP_650163.1. XM_645071.2.
    XP_650527.1. XM_645435.2.
    XP_655029.1. XM_649937.1.
    XP_655179.1. XM_650087.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4GSW X-ray 2.15 A/B 1-77 [» ]
    4GU2 X-ray 1.35 A 1-77 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi rna_EHI_083270-1 ; rna_EHI_083270-1 ; EHI_083270 .
    rna_EHI_083410-1 ; rna_EHI_083410-1 ; EHI_083410 .
    rna_EHI_156660-1 ; rna_EHI_156660-1 ; EHI_156660 .
    GeneIDi 3404456.
    3404829.
    3409345.
    3409499.
    KEGGi ehi:EHI_083270.
    ehi:EHI_083410.
    ehi:EHI_156660.
    ehi:EHI_178340.

    Phylogenomic databases

    KOi K02927.

    Family and domain databases

    InterProi IPR019956. Ubiquitin.
    IPR000626. Ubiquitin-like.
    IPR029071. Ubiquitin-rel_dom.
    IPR019954. Ubiquitin_CS.
    [Graphical view ]
    Pfami PF00240. ubiquitin. 1 hit.
    [Graphical view ]
    PRINTSi PR00348. UBIQUITIN.
    SMARTi SM00213. UBQ. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54236. SSF54236. 1 hit.
    PROSITEi PS00299. UBIQUITIN_1. 1 hit.
    PS50053. UBIQUITIN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Ubiquitin of Entamoeba histolytica deviates in six amino acid residues from the consensus of all other known ubiquitins."
      Wostmann C., Tannich E., Bakker-Grunwald T.
      FEBS Lett. 308:54-58(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE.
    2. "Characterization of ubiquitin genes and -transcripts and demonstration of a ubiquitin-conjugating system in Entamoeba histolytica."
      Wostmann C., Liakopoulos D., Ciechanover A., Bakker-Grunwald T.
      Mol. Biochem. Parasitol. 82:81-90(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: HM-1:IMSSImported.
    3. Bakker-Grunwald O.A.
      Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: HM-1:IMSSImported.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 30459 / HM-1:IMSSImported.
    5. Lorenzi H., Amedeo P., Inman J., Schobel S., Caler E.
      Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: ATCC 30459 / HM-1:IMSSImported.
    6. "Structural determinants of ubiquitin conjugation in Entamoeba histolytica."
      Bosch D.E., Siderovski D.P.
      J. Biol. Chem. 288:2290-2302(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.35 ANGSTROMS).

    Entry informationi

    Entry nameiC4M760_ENTHI
    AccessioniPrimary (citable) accession number: C4M760
    Secondary accession number(s): Q27935
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 7, 2009
    Last sequence update: July 7, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3