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C4M760 (C4M760_ENTHI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Ubiquitin, putative EMBL EAL44777.1
Gene names
Name:EhUBI1 EMBL CAA67177.1
ORF Names:EHI_083270 EMBL EAL44777.1, EHI_083410 EMBL EAL49643.1, EHI_156660 EMBL EAL45141.1, EHI_178340 EMBL EAL49792.1
OrganismEntamoeba histolytica [Reference proteome]
Taxonomic identifier5759 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaArchamoebaeEntamoebidaeEntamoeba

Protein attributes

Sequence length77 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4GU2 PDB 4GSW
Complete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
C4M760 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: 6B702034246910A4

FASTA778,698
        10         20         30         40         50         60 
MQIFVKTLTG KTITLEVEPN DSIDAIKAKI QEKEGIPPDQ QRLIFAGKQL EEGKTLSDYN 

        70 
IQKESTLHLV LRLRGGY 

« Hide

References

« Hide 'large scale' references
[1]"Ubiquitin of Entamoeba histolytica deviates in six amino acid residues from the consensus of all other known ubiquitins."
Wostmann C., Tannich E., Bakker-Grunwald T.
FEBS Lett. 308:54-58(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE.
[2]"Characterization of ubiquitin genes and -transcripts and demonstration of a ubiquitin-conjugating system in Entamoeba histolytica."
Wostmann C., Liakopoulos D., Ciechanover A., Bakker-Grunwald T.
Mol. Biochem. Parasitol. 82:81-90(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HM-1:IMSS EMBL CAA67177.1.
[3]Bakker-Grunwald O.A.
Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HM-1:IMSS EMBL CAA67177.1.
[4]"The genome of the protist parasite Entamoeba histolytica."
Loftus B.J., Anderson I., Davies R., Alsmark U.C., Samuelson J., Amedeo P., Roncaglia P., Berriman M., Hirt R.P., Mann B.J., Nozaki T., Suh B., Pop M., Duchene M., Ackers J., Tannich E., Leippe M., Hofer M. expand/collapse author list , Bruchhaus I., Willhoeft U., Bhattacharya A., Chillingworth T., Churcher C.M., Hance Z., Harris B., Harris D., Jagels K., Moule S., Mungall K.L., Ormond D., Squares R., Whitehead S., Quail M.A., Rabbinowitsch E., Norbertczak H., Price C., Wang Z., Guillen N., Gilchrist C., Stroup S.E., Bhattacharya S., Lohia A., Foster P.G., Sicheritz-Ponten T., Weber C., Singh U., Mukherjee C., El-Sayed N.M.A., Petri W.A., Clark C.G., Embley T.M., Barrell B.G., Fraser C.M., Hall N.
Nature 433:865-868(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 30459 / HM-1:IMSS.
[5]Lorenzi H., Amedeo P., Inman J., Schobel S., Caler E.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 30459 / HM-1:IMSS.
[6]"Structural determinants of ubiquitin conjugation in Entamoeba histolytica."
Bosch D.E., Siderovski D.P.
J. Biol. Chem. 288:2290-2302(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.35 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X98567 Genomic DNA. Translation: CAA67177.1.
DS571318 Genomic DNA. Translation: EAL44777.1.
DS571545 Genomic DNA. Translation: EAL45141.1.
DS571318 Genomic DNA. Translation: EAL49643.1.
DS571744 Genomic DNA. Translation: EAL49792.1.
PIRS29238.
RefSeqXP_650163.1. XM_645071.2.
XP_650527.1. XM_645435.2.
XP_655029.1. XM_649937.1.
XP_655179.1. XM_650087.2.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4GSWX-ray2.15A/B1-77[»]
4GU2X-ray1.35A1-77[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsrna_EHI_083270-1; rna_EHI_083270-1; EHI_083270.
rna_EHI_083410-1; rna_EHI_083410-1; EHI_083410.
rna_EHI_156660-1; rna_EHI_156660-1; EHI_156660.
GeneID3404456.
3404829.
3409345.
3409499.
KEGGehi:EHI_083270.
ehi:EHI_083410.
ehi:EHI_156660.
ehi:EHI_178340.

Phylogenomic databases

KOK02927.
ProtClustDBCLSZ2730177.

Family and domain databases

InterProIPR019956. Ubiquitin.
IPR000626. Ubiquitin-like.
IPR019954. Ubiquitin_CS.
[Graphical view]
PfamPF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSPR00348. UBIQUITIN.
SMARTSM00213. UBQ. 1 hit.
[Graphical view]
PROSITEPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC4M760_ENTHI
AccessionPrimary (citable) accession number: C4M760
Secondary accession number(s): Q27935
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: April 16, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)