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C4LJD5 (C4LJD5_CORK4) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:glyP EMBL ACR17940.1
Ordered Locus Names:ckrop_1195
OrganismCorynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) [Complete proteome] [HAMAP] EMBL ACR17940.1
Taxonomic identifier645127 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium

Protein attributes

Sequence length509 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalanine:sodium symporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C4LJD5 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: 783C379B01BE3BAB

FASTA50954,408
        10         20         30         40         50         60 
MTAIENAVTG SSDGLWTVIT WVLLAAGVWF CFRTVVVQIR MVPEMFRSLT EKPSDISKDK 

        70         80         90        100        110        120 
KGISAFKAFT ISAASRVGTG NIAGVAVAIT IGGPGAVFWM WLVAIVGGAT AFVESTLAQL 

       130        140        150        160        170        180 
YKVKDTDSYR GGPAYYITKG LNLKWLAAVF VVAITVTYGF VYNAVQSNSI VDAITESTGS 

       190        200        210        220        230        240 
DAMWWKALLG VALAILTALI VFGGVQRIAS VTNWLVPIMA VLYIVTGLIV VAVNIEQVPH 

       250        260        270        280        290        300 
MFAEIVTSAL GIREVAGATF GQAFMYGIRR GLFSNEAGEG SIPNAAATAS VSHPVKQGLI 

       310        320        330        340        350        360 
QTLGVYFDTI IVCSITAFII LLNNPSFGEG VESTSLTQNS VAAAVGHWGV HLVTVIIFFL 

       370        380        390        400        410        420 
AFSSVIGNYY YGESNIEFFT RNNKVMTAYR FLVCLCVLGG SLGKVGIVWA LADLFAGIMV 

       430        440        450        460        470        480 
AINLTAILPL GGAAIALLKN YRQQRNQGLS PVFHRDDLPN LPGHDRIECW DGSDPLTIRG 

       490        500 
DGQEVYGRRP GTPAPQVIRR SANGSVRAE 

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References

[1]"Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids."
Tauch A., Schneider J., Szczepanowski R., Tilker A., Viehoever P., Gartemann K.-H., Arnold W., Blom J., Brinkrolf K., Brune I., Goetker S., Weisshaar B., Goesmann A., Droege M., Puehler A.
J. Biotechnol. 136:22-30(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 44385 / CCUG 35717.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001620 Genomic DNA. Translation: ACR17940.1.
RefSeqYP_002906483.1. NC_012704.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING645127.ckrop_1195.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR17940; ACR17940; ckrop_1195.
GeneID7876538.
KEGGckp:ckrop_1195.
PATRIC21517733. VBICorKro120627_1231.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1115.
HOGENOMHOG000255107.
KOK03310.
OMAQLIVPVM.
ProtClustDBCLSK2502868.

Enzyme and pathway databases

BioCycCKRO645127:GI7D-1176-MONOMER.

Family and domain databases

InterProIPR001463. Na/Ala_symport.
[Graphical view]
PfamPF01235. Na_Ala_symp. 1 hit.
[Graphical view]
PRINTSPR00175. NAALASMPORT.
TIGRFAMsTIGR00835. agcS. 1 hit.
PROSITEPS00873. NA_ALANINE_SYMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC4LJD5_CORK4
AccessionPrimary (citable) accession number: C4LJD5
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)