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C4LGU9 (DCD_CORK4) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Deoxycytidine triphosphate deaminase

Short name=dCTP deaminase
EC=3.5.4.13
Gene names
Name:dcd
Ordered Locus Names:ckrop_0268
OrganismCorynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) [Complete proteome] [HAMAP]
Taxonomic identifier645127 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium

Protein attributes

Sequence length187 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Biological processNucleotide metabolism
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processdUMP biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

dUTP biosynthetic process

Inferred from electronic annotation. Source: InterPro

pyrimidine ribonucleotide biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functiondCTP deaminase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 187187Deoxycytidine triphosphate deaminase HAMAP-Rule MF_00146
PRO_1000203356

Sequences

Sequence LengthMass (Da)Tools
C4LGU9 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: 6B368DD1A79C5160

FASTA18720,468
        10         20         30         40         50         60 
MILSDRDIRS AIDSGHLGIS PFDPTMVQPS SIDVRLDRYF RVFNNARYTH IDPKQEQEDL 

        70         80         90        100        110        120 
TSLVEVKEGD AFILHPGEFV LGSTLEEFAL PADLAGRLEG KSSLGRLGLL THSTAGFIDP 

       130        140        150        160        170        180 
GFNGYITFEL SNASNLPIAL YPEMKVGQLA LFMMSSPAET PYGSGSLGSK YQGQRGPTAS 


KAYMNFR 

« Hide

References

[1]"Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids."
Tauch A., Schneider J., Szczepanowski R., Tilker A., Viehoever P., Gartemann K.-H., Arnold W., Blom J., Brinkrolf K., Brune I., Goetker S., Weisshaar B., Goesmann A., Droege M., Puehler A.
J. Biotechnol. 136:22-30(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 44385 / CCUG 35717.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001620 Genomic DNA. Translation: ACR17054.1.
RefSeqYP_002905597.1. NC_012704.1.

3D structure databases

ProteinModelPortalC4LGU9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING645127.ckrop_0268.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR17054; ACR17054; ckrop_0268.
GeneID7875458.
KEGGckp:ckrop_0268.
PATRIC21515773. VBICorKro120627_0277.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0717.
HOGENOMHOG000228601.
KOK01494.
OMANFHRTEI.
OrthoDBEOG67DPKR.

Enzyme and pathway databases

BioCycCKRO645127:GI7D-269-MONOMER.
UniPathwayUPA00610; UER00665.

Family and domain databases

Gene3D2.70.40.10. 1 hit.
HAMAPMF_00146. dCTP_deaminase.
InterProIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view]
PfamPF00692. dUTPase. 1 hit.
[Graphical view]
SUPFAMSSF51283. SSF51283. 1 hit.
TIGRFAMsTIGR02274. dCTP_deam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameDCD_CORK4
AccessionPrimary (citable) accession number: C4LGU9
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 7, 2009
Last modified: June 11, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways