C4LF42 (C4LF42_TOLAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Integrase family protein EMBL ACQ93209.1

Gene names

Ordered Locus Names:

Tola_1598

Organism

Tolumonas auensis (strain DSM 9187 / TA4) [Complete proteome] [HAMAP] EMBL ACQ93209.1

Taxonomic identifier

595494 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Tolumonas › Tolumonas auensis

Protein attributes

Sequence length	393 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA integration Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C4LF42 [UniParc]. Last modified July 7, 2009. Version 1. Checksum: 67684D6CBAC8870E	FASTA	393	45,890
	10 20 30 40 50 60 MGSIRARDQR LFFDFRYQGV RCREQTLLKD TKLNRARLEK IMSDIDKAIH LDQFVYCDFF 70 80 90 100 110 120 PDSIRCAAFE VIDAETKQRL EQRPEHLTFA SNLPTFAEFS YEWLSENEVH WKQSHLANVK 130 140 150 160 170 180 SIFENYLLPI FGHLPLDQIT REDILKLRTS LAKGKTASQR SITNDRVNHI MTPLRCVFSE 190 200 210 220 230 240 AALRFDIPSP FHNIKPLKIG RSNIEPFSLI EVRTFLAGVR ADFRNYYTVR FFSGMRTAEI 250 260 270 280 290 300 DGLRWKYVDL PNRQIVIEQT LVNGRPETPK TQASYRVIQI SEPVYQALLH QHDETGHYEF 310 320 330 340 350 360 VFCNEVGNPL DHRNVTKRVW NPTLAMLGLK RRRPYQTRHT TATLWLAAGE NPEWIAKQLG 370 380 390 HSTTKMLFEV YSRYVPNLTR QDGSAFNSLI SCN

References

[1]

"Complete sequence of Tolumonas auensis DSM 9187." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Spring S., Beller H. Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9187 / TA4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001616 Genomic DNA. Translation: ACQ93209.1.
RefSeq	YP_002892795.1. NC_012691.1.
3D structure databases
ProteinModelPortal	C4LF42.
ModBase	Search...
Protein-protein interaction databases
STRING	595494.Tola_1598.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACQ93209; ACQ93209; Tola_1598.
GeneID	7883492.
KEGG	tau:Tola_1598.
PATRIC	23979827. VBITolAue42623_1585.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0582.
HOGENOM	HOG000291850.
KO	K14059.
ProtClustDB	CLSK839822.
Family and domain databases
Gene3D	1.10.150.130. 1 hit. 1.10.443.10. 1 hit.
InterPro	IPR011010. DNA_brk_join_enz. IPR013762. Integrase-like_cat-core. IPR002104. Integrase_catalytic. IPR023109. Integrase_recombinase_N. IPR022000. Phage_p02_N. [Graphical view]
Pfam	PF12167. DUF3596. 1 hit. PF00589. Phage_integrase. 1 hit. [Graphical view]
SUPFAM	SSF56349. DNA_brk_join_enz. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C4LF42_TOLAT

Accession

Primary (citable) accession number: C4LF42

Entry history

Integrated into UniProtKB/TrEMBL:	July 7, 2009
Last sequence update:	July 7, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)