C4LBU0 (C4LBU0_TOLAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886

Gene names

Ordered Locus Names:

Tola_2771

Organism

Tolumonas auensis (strain DSM 9187 / TA4) [Complete proteome] [HAMAP] EMBL ACQ94364.1

Taxonomic identifier

595494 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Tolumonas › Tolumonas auensis

Protein attributes

Sequence length	326 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
Molecular function	Isomerase RuleBase RU003886
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C4LBU0 [UniParc]. Last modified July 7, 2009. Version 1. Checksum: 3136D31DB934A196	FASTA	326	36,890
	10 20 30 40 50 60 MSQAIQLTGT IEPHHEGKRL DQVLADLFTD YSRTRLKEWI LGGKVQLDGK VCLLPKEKVM 70 80 90 100 110 120 GGQQVEIATE LEDDTRWQAQ DLPLNIVYED EHLLVIDKPA GLVVHPGAGT PDGTVLNALL 130 140 150 160 170 180 HRYPDIAEVP RAGIVHRLDK ETTGLMVVAK TIPAQIRLVY ALQKRRITRE YEAIVVGHMT 190 200 210 220 230 240 AGGTVDEPIS RHSTQRTMMA VNPMGKPAIT HYRVAERFRA HTRLRCRLET GRTHQIRVHM 250 260 270 280 290 300 AHINHALVGD PVYGGRLRPI RNASVELSDF LRTFRRQALH ATMLRLTHPI TGEEMEWHSP 310 320 IPDDMVQLIE VLRLDSAEHP DDIVWV

References

[1]

"Complete sequence of Tolumonas auensis DSM 9187." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Spring S., Beller H. Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9187 / TA4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001616 Genomic DNA. Translation: ACQ94364.1.
RefSeq	YP_002893950.1. NC_012691.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	595494.Tola_2771.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACQ94364; ACQ94364; Tola_2771.
GeneID	7885603.
KEGG	tau:Tola_2771.
PATRIC	23982267. VBITolAue42623_2756.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0564.
HOGENOM	HOG000275919.
KO	K06180.
ProtClustDB	CLSK729028.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006225. PsdUridine_synth_RluC/D. IPR006224. PsdUridine_synth_RluC/D_CS. IPR006145. PsdUridine_synth_RsuA/RluD. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00005. rluA_subfam. 1 hit.
PROSITE	PS01129. PSI_RLU. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C4LBU0_TOLAT

Accession

Primary (citable) accession number: C4LBU0

Entry history

Integrated into UniProtKB/TrEMBL:	July 7, 2009
Last sequence update:	July 7, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)