C4L7T0 (RL3_TOLAT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L3

Gene names

Name:	rplC
Ordered Locus Names:	Tola_0099

Organism

Tolumonas auensis (strain DSM 9187 / TA4) [Complete proteome] [HAMAP]

Taxonomic identifier

595494 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Tolumonas › Tolumonas auensis

Protein attributes

Sequence length	212 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01325
Subunit structure	Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity.
Post-translational modification	Methylated by PrmB By similarity.
Sequence similarities	Belongs to the ribosomal protein L3P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Methylation
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 212	212	50S ribosomal protein L3 HAMAP-Rule MF_01325		PRO_1000214530
Amino acid modifications
	Modified residue	153	1	N5-methylglutamine By similarity

Sequences

	Sequence		Length	Mass (Da)
	C4L7T0 [UniParc]. Last modified July 7, 2009. Version 1. Checksum: 46A37EC43F370E3B	FASTA	212	22,667
	10 20 30 40 50 60 MTLGLVGRKL GMTRVFTEDG VSIPVTVIEV EANRVTQLKT LETDGYTAVQ VTTGVKKASR 70 80 90 100 110 120 LTKAEAGHFA KAEVEAGRGL WEFRLNDGEG ADLTVGSELK VDIFADVKKA DVTGISKGKG 130 140 150 160 170 180 FAGVVKRWNF RTQDMTHGNS RSHRVPGSIG QNQSPGKVFK GKKMAGHLGC ERVTVQSLDI 190 200 210 VRVDVERNLL LIKGAVPGAT NGDVIVKPAV KA

References

[1]

"Complete sequence of Tolumonas auensis DSM 9187." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Spring S., Beller H. Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9187 / TA4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001616 Genomic DNA. Translation: ACQ91729.1.
RefSeq	YP_002891315.1. NC_012691.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	595494.Tola_0099.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACQ91729; ACQ91729; Tola_0099.
GeneID	7886087.
KEGG	tau:Tola_0099.
PATRIC	23976767. VBITolAue42623_0101.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0087.
HOGENOM	HOG000100368.
KO	K02906.
Family and domain databases
HAMAP	MF_01325_B. Ribosomal_L3_B.
InterPro	IPR000597. Ribosomal_L3. IPR019927. Ribosomal_L3_bac/org-type. IPR019926. Ribosomal_L3_CS. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
PANTHER	PTHR11229. PTHR11229. 1 hit.
Pfam	PF00297. Ribosomal_L3. 1 hit. [Graphical view]
SUPFAM	SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR03625. L3_bact. 1 hit.
PROSITE	PS00474. RIBOSOMAL_L3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL3_TOLAT

Accession

Primary (citable) accession number: C4L7T0

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 22, 2009
Last sequence update:	July 7, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program