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C4L2D6 (C4L2D6_EXISA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length362 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site291Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2491Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1211Substrate By similarity HAMAP-Rule MF_01201
Binding site2961Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue291N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
C4L2D6 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: ED4BDD942886221C

FASTA36240,918
        10         20         30         40         50         60 
MGVTIDLNAI RENKRRIEAL GRPVFAVVKN NAYNLGMEPV VTTLYDEGVR HFMVTTLEEA 

        70         80         90        100        110        120 
LEVRTHAESA RVLIMNPVYT WEHVHAHDFD VAIGSYEWLV SQREHLDGVR LHLKLDVGMN 

       130        140        150        160        170        180 
RFGAKTFEEA LRIVAFCQNE GLNLVGLCTH FPLADADNAE VEHSVQVERF ADWSTRLMER 

       190        200        210        220        230        240 
HTFELIHAAN SAATLQDDSR LHHCTHVRVG IFLYGYSSVE PVEWLVPAFY WETEVVAVHD 

       250        260        270        280        290        300 
IEAGAHVGYG TGYTAESKER IAVLPVGYGD GLMRARRHLP VHIEGRAYPF VSNIFMSHSF 

       310        320        330        340        350        360 
IKVDEDVQIG DRVALYGIET KIDDVTRVGY ANNSEQLCAR SWRVPHRFEG GIVCTPPINQ 


NV 

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References

[1]"Complete sequence of Exiguobacterium sp. AT1b."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G. expand/collapse author list , Ramaley R.F., Rodrigues D.F., Vishnivetskaya T.A., Kathariou S., Tiedje J.M., Richardson P.
Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1283 / AT1b.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001615 Genomic DNA. Translation: ACQ71188.1.
RefSeqYP_002886633.1. NC_012673.1.

3D structure databases

ProteinModelPortalC4L2D6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING360911.EAT1b_2266.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACQ71188; ACQ71188; EAT1b_2266.
GeneID7870853.
KEGGeat:EAT1b_2266.
PATRIC21879750. VBIExiSp39724_2242.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000280025.
KOK01775.
OMAAYHYGLE.
OrthoDBEOG6PP9NJ.
ProtClustDBCLSK2488983.

Enzyme and pathway databases

BioCycESP360911:GI4R-2342-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC4L2D6_EXISA
AccessionPrimary (citable) accession number: C4L2D6
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: February 19, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)