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C4L130 (C4L130_EXISA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ornithine carbamoyltransferase, catabolic HAMAP-Rule MF_01109
Short name=OTCase HAMAP-Rule MF_01109
EC=2.1.3.3 HAMAP-Rule MF_01109
Alternative name(s):
Ornithine carbamoyltransferase HAMAP-Rule MF_01109
Gene names
Name:arcB HAMAP-Rule MF_01109
Ordered Locus Names:EAT1b_2070
OrganismExiguobacterium sp. (strain ATCC BAA-1283 / AT1b) [Complete proteome] [HAMAP] EMBL ACQ70993.1
Taxonomic identifier360911 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillales Family XII. Incertae Sedis › Exiguobacterium

Protein attributes

Sequence length308 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline. HAMAP-Rule MF_01109 SAAS SAAS002292

Pathway

Amino-acid degradation; L-arginine degradation via ADI pathway; carbamoyl phosphate from L-arginine: step 2/2. HAMAP-Rule MF_01109

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01109 SAAS SAAS002292.

Sequence similarities

Belongs to the ATCase/OTCase family. HAMAP-Rule MF_01109 RuleBase RU003634

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region54 – 585Carbamoyl phosphate binding By similarity HAMAP-Rule MF_01109
Region266 – 2694Ornithine binding By similarity HAMAP-Rule MF_01109

Sites

Binding site1051Carbamoyl phosphate By similarity HAMAP-Rule MF_01109
Binding site1321Carbamoyl phosphate By similarity HAMAP-Rule MF_01109
Site311Important for structural integrity By similarity HAMAP-Rule MF_01109
Site1451Important for structural integrity By similarity HAMAP-Rule MF_01109

Sequences

Sequence LengthMass (Da)Tools
C4L130 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: C4F5365611E25102

FASTA30833,672
        10         20         30         40         50         60 
MTVKTIQHFL TMEELTPDTL DSLMQLAHEV KRSPQSYATA LTGKKVALLF EKASTRTRMS 

        70         80         90        100        110        120 
FEVGVVELGG YPLFLSGQDL QIGRGEPLTD TIQVMSRYVD ALMIRTYAHE TVETLAQHGS 

       130        140        150        160        170        180 
IPIINGLTDL HHPCQVLADL LTIEEQFGSR AGKVLAYIGD GNNMAHSLMI GGALSGMHIR 

       190        200        210        220        230        240 
IASPNGYTVD HAIYEKAQKL ATSTGGSIAL FENPSLAANE ADIVYTDVFA SMGQEGEAEE 

       250        260        270        280        290        300 
RLMKFNGFQV NKELMALANP DAIFLHCLPA HRGEEVTADV IDGPQSWVFD QAENRLHAQK 


ALMLTLLT

« Hide

References

[1]"Complete sequence of Exiguobacterium sp. AT1b."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G. expand/collapse author list , Ramaley R.F., Rodrigues D.F., Vishnivetskaya T.A., Kathariou S., Tiedje J.M., Richardson P.
Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1283 / AT1b.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001615 Genomic DNA. Translation: ACQ70993.1.
RefSeqYP_002886438.1. NC_012673.1.

3D structure databases

ProteinModelPortalC4L130.
ModBaseSearch...

Protein-protein interaction databases

STRING360911.EAT1b_2070.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACQ70993; ACQ70993; EAT1b_2070.
GeneID7868877.
KEGGeat:EAT1b_2070.
PATRIC21879310. VBIExiSp39724_2049.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0078.
HOGENOMHOG000022686.
KOK00611.
OMAKHLLSIK.
ProtClustDBCLSK2489014.

Enzyme and pathway databases

BioCycESP360911:GI4R-2119-MONOMER.
UniPathwayUPA00254; UER00365.

Family and domain databases

HAMAPMF_01109. OTCase.
InterProIPR006132. Asp/Orn_carbamoyltranf_P-bd.
IPR006130. Asp/Orn_carbamoylTrfase.
IPR006131. Asp_carbamoyltransf_Asp/Orn-bd.
IPR002292. Orn/put_carbamltrans.
IPR024904. Orn_carbamltrans.
[Graphical view]
PfamPF00185. OTCace. 1 hit.
PF02729. OTCace_N. 1 hit.
[Graphical view]
PRINTSPR00100. AOTCASE.
PR00102. OTCASE.
SUPFAMSSF53671. Asp/Orn_carbamoyltranf. 1 hit.
TIGRFAMsTIGR00658. orni_carb_tr. 1 hit.
PROSITEPS00097. CARBAMOYLTRANSFERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC4L130_EXISA
AccessionPrimary (citable) accession number: C4L130
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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