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C4L0Z5

- SYR_EXISA

UniProt

C4L0Z5 - SYR_EXISA

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (07 Jul 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciESP360911:GI4R-2084-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:EAT1b_2035
    OrganismiExiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
    Taxonomic identifieri360911 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillales Family XII. Incertae SedisExiguobacterium
    ProteomesiUP000000716: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 560560Arginine--tRNA ligasePRO_1000203095Add
    BLAST

    Proteomic databases

    PRIDEiC4L0Z5.

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi360911.EAT1b_2035.

    Structurei

    3D structure databases

    ProteinModelPortaliC4L0Z5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi121 – 13111"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247211.
    KOiK01887.
    OMAiKVNGMST.
    OrthoDBiEOG6JB13C.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C4L0Z5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSYERKYAEA LSRVIGEELT IDQIEALIEK PKHEAHGDLA FPCFQLAKAY    50
    RKAPVMIATD IANELNDELF TKVEAAGPYV NVFLSRDVVS KEIINTVLEE 100
    KSEYATHEAR NETIVTDFSS PNIAKPFSMG HLRSTVIGNA INQIARKNGY 150
    DVVGVNHLGD WGTQFGKLMV AYKKWGDEEA VRANPIAELL KLYVHFHEEA 200
    KTQPELEDEG RAWFKKLEDG DAEATELWQW FRDESLKEFQ KVYDLLGVKF 250
    ESFNGEAFYN DKMGRVVEML EAKNLLVESE GAMVVSLEEE NLPPCLIKKK 300
    DGATLYATRD LAAAIYRYET YNFVQANYVV GGEQALHFKQ LFSVLRKLGY 350
    DFVDGMHHVP FGLILQEGKK MSTRKGRIVL LEEVLKEAIE KAQANIEQKN 400
    PDLANAQDVA RMVGVGAVVF HDLKNERINN IEFDLDSMLK FEGETGPYVQ 450
    YTNARANSLL RKGNYDGSPF TGADDDYSWG VVTMLNAFPH VITRAHERRE 500
    PSIISRYVLD LAQAFNKYYG HVRVLEEDAG KQSRLALVKA VTLVLTEGLR 550
    LLGVEAPEEM 560
    Length:560
    Mass (Da):63,311
    Last modified:July 7, 2009 - v1
    Checksum:i4740E3A6F126438A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001615 Genomic DNA. Translation: ACQ70958.1.
    RefSeqiWP_015880517.1. NC_012673.1.
    YP_002886403.1. NC_012673.1.

    Genome annotation databases

    EnsemblBacteriaiACQ70958; ACQ70958; EAT1b_2035.
    GeneIDi7868842.
    KEGGieat:EAT1b_2035.
    PATRICi21879240. VBIExiSp39724_2014.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001615 Genomic DNA. Translation: ACQ70958.1 .
    RefSeqi WP_015880517.1. NC_012673.1.
    YP_002886403.1. NC_012673.1.

    3D structure databases

    ProteinModelPortali C4L0Z5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 360911.EAT1b_2035.

    Proteomic databases

    PRIDEi C4L0Z5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACQ70958 ; ACQ70958 ; EAT1b_2035 .
    GeneIDi 7868842.
    KEGGi eat:EAT1b_2035.
    PATRICi 21879240. VBIExiSp39724_2014.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247211.
    KOi K01887.
    OMAi KVNGMST.
    OrthoDBi EOG6JB13C.

    Enzyme and pathway databases

    BioCyci ESP360911:GI4R-2084-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-1283 / AT1b.

    Entry informationi

    Entry nameiSYR_EXISA
    AccessioniPrimary (citable) accession number: C4L0Z5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 22, 2009
    Last sequence update: July 7, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3