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Protein

DNA-directed RNA polymerase subunit H

Gene

rpoH

Organism
Sulfolobus islandicus (strain M.16.4 / Kamchatka #3)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferase, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit HUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
Name:rpoHUniRule annotation
Ordered Locus Names:M164_1917
OrganismiSulfolobus islandicus (strain M.16.4 / Kamchatka #3)
Taxonomic identifieri426118 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001479 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymerase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10002019501 – 84DNA-directed RNA polymerase subunit HAdd BLAST84

Structurei

3D structure databases

SMRiC4KIV6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000109413
KOiK03053
OMAiPKIYHDD
OrthoDBiPOG093Z0M57

Family and domain databases

Gene3Di3.90.940.20, 1 hit
HAMAPiMF_00025 RNApol_RpoH_RPB5, 1 hit
InterProiView protein in InterPro
IPR000783 RNA_pol_subH/Rpb5_C
IPR020608 RNA_pol_subH/Rpb5_CS
IPR035913 RPB5-like
IPR020609 RpoH/RPB5
PfamiView protein in Pfam
PF01191 RNA_pol_Rpb5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155 RNA_pol_subH/Rpb5_C, 1 hit
SUPFAMiSSF55287 SSF55287, 1 hit
PROSITEiView protein in PROSITE
PS01110 RNA_POL_H_23KD, 1 hit

Sequencei

Sequence statusi: Complete.

C4KIV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGSSNRKID PRIHYLVPKH EVLSIDEAYK ILKELGIRPE QLPWIRASDP
60 70 80
VARSINAKPG DIIRIIRKSQ LYGEVVSYRY VISG
Length:84
Mass (Da):9,671
Last modified:July 7, 2009 - v1
Checksum:i2B26E5F522846532
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001402 Genomic DNA Translation: ACR42520.1

Genome annotation databases

EnsemblBacteriaiACR42520; ACR42520; M164_1917
KEGGisid:M164_1917

Similar proteinsi

Entry informationi

Entry nameiRPOH_SULIK
AccessioniPrimary (citable) accession number: C4KIV6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 7, 2009
Last modified: March 28, 2018
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome
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Main funding by: National Institutes of Health