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Protein

30S ribosomal protein S6e

Gene

rps6e

Organism
Sulfolobus islandicus (strain M.16.4 / Kamchatka #3)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciSISL426118:GI01-1793-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6eUniRule annotation
Gene namesi
Name:rps6eUniRule annotation
Ordered Locus Names:M164_1740
OrganismiSulfolobus islandicus (strain M.16.4 / Kamchatka #3)
Taxonomic identifieri426118 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001479 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 21421430S ribosomal protein S6ePRO_1000206623Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6e family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000009829.
KOiK02991.
OMAiFRARAWQ.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C4KID0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDFKIVISD PQSVEPKRIK VKVKANDQIK SIAGEKEGKA VPQAKVNEKT
60 70 80 90 100
KQLLNIDTLI TLEITKQEGD KKVKVKSHFK VEVDNNVPDN EVWISKTMAE
110 120 130 140 150
KFGAEDFEAI AYRTKTLQIS IDQDKATNLV GLKIGDTFEA NQLIGLPVKL
160 170 180 190 200
KITGGSDNSG FPMRFDVTGA AKRKILLSGP PGFYPNEDGE RRRKTIRGNT
210
ISQEIVQINT IIVR
Length:214
Mass (Da):23,802
Last modified:July 7, 2009 - v1
Checksum:iC3858857C4EFBC53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001402 Genomic DNA. Translation: ACR42344.1.
RefSeqiWP_012711673.1. NC_012726.1.

Genome annotation databases

EnsemblBacteriaiACR42344; ACR42344; M164_1740.
GeneIDi8761784.
KEGGisid:M164_1740.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001402 Genomic DNA. Translation: ACR42344.1.
RefSeqiWP_012711673.1. NC_012726.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACR42344; ACR42344; M164_1740.
GeneIDi8761784.
KEGGisid:M164_1740.

Phylogenomic databases

HOGENOMiHOG000009829.
KOiK02991.
OMAiFRARAWQ.

Enzyme and pathway databases

BioCyciSISL426118:GI01-1793-MONOMER.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M.16.4 / Kamchatka #3.

Entry informationi

Entry nameiRS6E_SULIK
AccessioniPrimary (citable) accession number: C4KID0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 7, 2009
Last modified: May 11, 2016
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.