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C4KHE0 (C4KHE0_SULIK) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Shwachman-Bodian-Diamond syndrome protein EMBL ACR42004.1
Gene names
Ordered Locus Names:M164_1398
OrganismSulfolobus islandicus (strain M.16.4 / Kamchatka #3) [Complete proteome] [HAMAP]
Taxonomic identifier426118 [NCBI]
Taxonomic lineageArchaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus ›

Protein attributes

Sequence length233 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processribosome biogenesis

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C4KHE0 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: 61694121F322AF4A

FASTA23326,227
        10         20         30         40         50         60 
MTKERDYVVV KYDSHGERFE ILAKPKEALA FRSGKSISLS DVVVSDTIYK DVKKGLKASP 

        70         80         90        100        110        120 
ASLKKVFGTT DFETIVKEIL LKGELPVTAE QRKEMLETKR KQIIDFIHRN AVDPKTNLPI 

       130        140        150        160        170        180 
PPTRLEMAME QARIQIDLNK DVEAQAMQIV KEISKIIPIK IARALLSIKV PSEYSSKVRS 

       190        200        210        220        230 
QLHNLGEVKK ANWLEDGTLL AELEIPAGAQ QDVIDKLNNL TKGEVEVKVL QVR

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References

[1]"Biogeography of the Sulfolobus islandicus pan-genome."
Reno M.L., Held N.L., Fields C.J., Burke P.V., Whitaker R.J.
Proc. Natl. Acad. Sci. U.S.A. 106:8605-8610(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M.16.4 / Kamchatka #3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001402 Genomic DNA. Translation: ACR42004.1.
RefSeqYP_002914672.1. NC_012726.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING426118.M164_1398.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR42004; ACR42004; M164_1398.
GeneID7939917.
KEGGsid:M164_1398.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1500.
HOGENOMHOG000229540.
KOK14574.
OMADPYLARD.
ProtClustDBPRK13760.

Enzyme and pathway databases

BioCycSISL426118:GI01-1440-MONOMER.

Family and domain databases

InterProIPR009022. EFG_III-V.
IPR018978. Ribosome_mat_SBDS_C.
IPR019783. Ribosome_mat_SBDS_N.
IPR002140. Ribosome_maturation_pr_SBDS.
[Graphical view]
PANTHERPTHR10927. PTHR10927. 1 hit.
PfamPF01172. SBDS. 1 hit.
PF09377. SBDS_C. 1 hit.
[Graphical view]
SUPFAMSSF54980. EFG_III_V. 1 hit.
SSF89895. Ribosome_mat_SBDS_N. 1 hit.
TIGRFAMsTIGR00291. RNA_SBDS. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC4KHE0_SULIK
AccessionPrimary (citable) accession number: C4KHE0
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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