C4KC02 (C4KC02_THASP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Two component, sigma54 specific, transcriptional regulator, Fis family EMBL ACR01883.1

Gene names

Ordered Locus Names:

Tmz1t_3288 EMBL ACR01883.1

Organism

Thauera sp. (strain MZ1T) [Complete proteome] [HAMAP] EMBL ACR01883.1

Taxonomic identifier

85643 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Thauera

Protein attributes

Sequence length	463 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 sigma-54 factor interaction domain. RuleBase RU000717 SAAS SAAS025662

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000717 SAAS SAAS025662
Ligand	ATP-binding RuleBase RU000717 SAAS SAAS025662 DNA-binding SAAS SAAS025662 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW DNA binding Inferred from electronic annotation. Source: UniProtKB-KW nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C4KC02 [UniParc]. Last modified July 7, 2009. Version 1. Checksum: D6EBF54EC0CFE667	FASTA	463	50,077
	10 20 30 40 50 60 MTQVDRRNRP RAADVLVVDD EDDIRELLEL SLMRMGLACD TAGSVGAARA LLAERSYRLC 70 80 90 100 110 120 LTDMRLPDGD GLELVEYIQT LRPGLPVAVI TAFGSIETAI RALKLGAFDF VTKPVELKAL 130 140 150 160 170 180 RELVQHALKL HAVEPVEHGA ASAERSLIGH SAAFVQLRAQ AGKLARNQAP VFIHGESGTG 190 200 210 220 230 240 KEVIARYIHA LGARAAGPFV PVNCGAISPE LMESEFFGHR KGSFTGATAD KSGLFQAAGG 250 260 270 280 290 300 GTLFLDEIGE LPLAMQVKLL RAIQERAVRP VGAHAEEPVD VRILSASHQD LGRLVAEGRF 310 320 330 340 350 360 RQDLFFRINV ITLRVPPLRE RREDIPDLAA HILARLAVRE GGAPRRLSAA ALEALQAYAF 370 380 390 400 410 420 PGNVRELENL LERACALCEG EEIGAGDLGV EDDCGALAAP GGGENGASPA TEAEVAGEGR 430 440 450 460 DEVERLRIIR ALEQTRWNRS AAARNLGMTL RQLRYRLQKW GMD

References

[1]

"Complete sequence of chromosome of Thauera sp. MZ1T." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sayler G.S. Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MZ1T EMBL ACR01883.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001281 Genomic DNA. Translation: ACR01883.1.
RefSeq	YP_002890260.1. NC_011662.2.
3D structure databases
ProteinModelPortal	C4KC02.
ModBase	Search...
Protein-protein interaction databases
STRING	85643.Tmz1t_3288.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACR01883; ACR01883; Tmz1t_3288.
GeneID	7874186.
KEGG	tmz:Tmz1t_3288.
PATRIC	23882712. VBIThaSp83776_3194.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2204.
HOGENOM	HOG000058489.
KO	K02667.
OMA	KPVELKA.
ProtClustDB	CLSK766725.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
InterPro	IPR003593. AAA+_ATPase. IPR011006. CheY-like_superfamily. IPR009057. Homeodomain-like. IPR002197. HTH_Fis. IPR001789. Sig_transdc_resp-reg_receiver. IPR002078. Sigma_54_int. IPR025662. Sigma_54_int_dom_ATP-bd_1. IPR025944. Sigma_54_int_dom_CS. [Graphical view]
Pfam	PF02954. HTH_8. 1 hit. PF00072. Response_reg. 1 hit. PF00158. Sigma54_activat. 1 hit. [Graphical view]
PRINTS	PR01590. HTHFIS.
SMART	SM00382. AAA. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF52172. CheY_like. 1 hit. SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS50110. RESPONSE_REGULATORY. 1 hit. PS00675. SIGMA54_INTERACT_1. 1 hit. PS00688. SIGMA54_INTERACT_3. 1 hit. PS50045. SIGMA54_INTERACT_4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C4KC02_THASP

Accession

Primary (citable) accession number: C4KC02

Entry history

Integrated into UniProtKB/TrEMBL:	July 7, 2009
Last sequence update:	July 7, 2009
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)