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C4KBF0 (C4KBF0_THASP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641
EC=2.3.3.9 HAMAP MF_00641
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Tmz1t_3129
OrganismThauera sp. (strain MZ1T) [Complete proteome] [HAMAP] EMBL ACR01726.1
Taxonomic identifier85643 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Thauera

Protein attributes

Sequence length727 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3401Proton acceptor By similarity HAMAP MF_00641
Active site6331Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
C4KBF0 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: DC2E709ED700E91D

FASTA72778,491
        10         20         30         40         50         60 
MTERVSVQRL QVAANLKRFI EEEALPGSGV DAAAFWSGFD ALVHDLAPKN AALLAERDRI 

        70         80         90        100        110        120 
QAEIDAWHRA HPGPIADMAA YKAFLSSIGY LLPVPAGAKA TTTNVDDELA VQAGPQLVVP 

       130        140        150        160        170        180 
VMNARYALNA ANARWGSLYD ALYGTDAIPQ KDGAELTKGY NPVRGAKVIA FGRQVLDQAA 

       190        200        210        220        230        240 
PLAGASHADA AGYAVEAGRL VVKLQSGAST GLQQAEKFVG FQGEAAAPRA VLLKNNGLHI 

       250        260        270        280        290        300 
EIQIDRSGAI GKSDAAGVND LLMEAALSTI MDCEDSVAAV DADDKVVVYR NWLGLMDGTL 

       310        320        330        340        350        360 
EDTFDKGGKP MTRRLNADRE YTGADGKPVK LHGRALLFVR NVGHLMTNPA ILWGEGKEIP 

       370        380        390        400        410        420 
EGIMDAVVTT LIAKRDLERR GNSRKGSIYI VKPKMHGPAE IGFADELFTR VEQLLGLPAN 

       430        440        450        460        470        480 
TVKLGIMDEE RRTSVNLRAC IAAAPARVAF INTGFLDRTG DEMHTSMEAG AMMRKGDIKN 

       490        500        510        520        530        540 
SKWIAAYERR NVLIGLAAGL RGRAQIGKGM WAMPDLMAAM LEQKIGHPKA GANTAWVPSP 

       550        560        570        580        590        600 
TAATLHALHY HQVSVAAVQQ DIEKLDLDKE AEALLDDLLT IPVVAKAEWS ETERQQELDN 

       610        620        630        640        650        660 
NCQGILGYVV RWVEQGVGCS KVPDINDIGL MEDRATLRIS SQHIANWLRH GVVPAEQVEA 

       670        680        690        700        710        720 
TLERMAAVVD GQNAGDPLYR PMAPNFDDSV AYQAARALIF EGCAQPSGYT EPLLHRYRQQ 


FKAKVGA

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References

[1]"Complete sequence of chromosome of Thauera sp. MZ1T."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sayler G.S.
Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MZ1T.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001281 Genomic DNA. Translation: ACR01726.1.
RefSeqYP_002890103.1. NC_011662.2.

3D structure databases

ProteinModelPortalC4KBF0.
SMRC4KBF0. Positions 9-722.
ModBaseSearch...

Protein-protein interaction databases

STRINGC4KBF0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7874271.
GenomeReviewsGene locus Tmz1t_3129 in contig CP001281_GR.
KEGGtmz:Tmz1t_3129.
PATRIC23882386. VBIThaSp83776_3039.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAENANWSV.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC4KBF0_THASP
AccessionPrimary (citable) accession number: C4KBF0
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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