Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Type III outer membrane secretin

Gene

ssaC

Organism
Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Type III outer membrane secretinImported
Gene namesi
Name:ssaCImported
Ordered Locus Names:HDEF_0147Imported
OrganismiHamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)Imported
Taxonomic identifieri572265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeaphid secondary symbiontsCandidatus Hamiltonella
Proteomesi
  • UP000002334 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500293978721 – 496Sequence analysisAdd BLAST476

Interactioni

Protein-protein interaction databases

STRINGi572265.HDEF_0147.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini177 – 268Secretin_NInterPro annotationAdd BLAST92

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

C4K8T3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKIISLFIC FLLSNPFLKA QTIHWQGAPF FIYTHGISLG KLLKEIGLNY
60 70 80 90 100
GIPVIVSPDI TDTFSGELKD KTPNQMLDEL STRYNLTWYF DGDVIYFYKI
110 120 130 140 150
QDIKKQILSS GDLPIKALIK YLKNSGLPNG KNCALKALTR LNTVEISGVP
160 170 180 190 200
VCIERATQLT SLLNTQRQNY NDNKQAVRVF SLKYASATDT TYQYRDQKVT
210 220 230 240 250
LPGLVSVLRD MNSQNTIAIG ENKTSGKDQS LGLPLFSADP RQNALIVRDR
260 270 280 290 300
VVNMPIYASL VKQLDVRPIE IEISVAIIDV DASDINQLGI NWEASASLGG
310 320 330 340 350
GKVSFNKGFI SSDDGGFSTV VGNDFMVRIN ALEQHSKARV LSRPSIVTLN
360 370 380 390 400
NIQAVLDKNV TFYTKLQGDK VAKLDSRTTG TLMQVTPRMI KDKGKEDVLL
410 420 430 440 450
NLDIQDGQQR PSINNTTEIL PQIDNSQITT QAVLKPGQNL LLGGFIQDSQ
460 470 480 490
KASKHKIPLL GDIPLIGGLF RSSSKQSSSV VRLFLIKAVP VKNKRQ
Length:496
Mass (Da):54,905
Last modified:July 7, 2009 - v1
Checksum:iE28D3CDC0971F10F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001277 Genomic DNA. Translation: ACQ66920.1.
RefSeqiWP_012737885.1. NC_012751.1.

Genome annotation databases

EnsemblBacteriaiACQ66920; ACQ66920; HDEF_0147.
KEGGihde:HDEF_0147.
PATRICi31971704. VBICanHam112931_0148.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001277 Genomic DNA. Translation: ACQ66920.1.
RefSeqiWP_012737885.1. NC_012751.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi572265.HDEF_0147.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACQ66920; ACQ66920; HDEF_0147.
KEGGihde:HDEF_0147.
PATRICi31971704. VBICanHam112931_0148.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC4K8T3_HAMD5
AccessioniPrimary (citable) accession number: C4K8T3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: November 2, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.