C4K0J6 (RBFA_RICPU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribosome-binding factor A

Gene names

Name:	rbfA
Ordered Locus Names:	RPR_00615

Organism

Rickettsia peacockii (strain Rustic) [Complete proteome] [HAMAP]

Taxonomic identifier

562019 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia peacockii

Protein attributes

Sequence length	120 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA By similarity. HAMAP-Rule MF_00003
Subcellular location	Cytoplasm Potential HAMAP-Rule MF_00003.
Sequence similarities	Belongs to the RbfA family.

Ontologies

Keywords
Biological process	rRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	rRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 120	120	Ribosome-binding factor A HAMAP-Rule MF_00003		PRO_1000201651

Sequences

	Sequence		Length	Mass (Da)
	C4K0J6 [UniParc]. Last modified July 7, 2009. Version 1. Checksum: B8C0CC62DD4BACD2	FASTA	120	13,929
	10 20 30 40 50 60 MKKLTKTHSH RQQKLASIIN EALIEILRRG KMLDSRLFDC PLTITKVIVT TDLKIANCYF 70 80 90 100 110 120 LPFNTKLTID EIMDALNNSK NAIRNFITNK INMKFSPDIR FHYDHGFDNA IKVAHLLKDL

References

[1]

"Genome sequence of the endosymbiont Rickettsia peacockii and comparison with virulent Rickettsia rickettsii: identification of virulence factors." Felsheim R.F., Kurtti T.J., Munderloh U.G. PLoS ONE 4:E8361-E8361(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Rustic.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001227 Genomic DNA. Translation: ACR47097.1.
RefSeq	YP_002916145.1. NC_012730.1.
3D structure databases
ProteinModelPortal	C4K0J6.
ModBase	Search...
Protein-protein interaction databases
STRING	562019.RPR_00615.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACR47097; ACR47097; RPR_00615.
GeneID	7942960.
KEGG	rpk:RPR_00615.
PATRIC	17897775. VBIRicPea48268_0122.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0858.
HOGENOM	HOG000272967.
KO	K02834.
OMA	KINMKFS.
ProtClustDB	PRK00521.
Enzyme and pathway databases
BioCyc	RPEA562019:GJD7-83-MONOMER.
Family and domain databases
Gene3D	3.30.300.20. 1 hit.
HAMAP	MF_00003. RbfA.
InterPro	IPR015946. KH_dom-like_a/b. IPR000238. Ribosome-bd_facA. IPR023799. Ribosome-bd_facA_dom. IPR020053. Ribosome-bd_factorA_CS. [Graphical view]
Pfam	PF02033. RBFA. 1 hit. [Graphical view]
ProDom	PD007327. Rib_bd_factA. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF89919. Rib_bd_factA. 1 hit.
TIGRFAMs	TIGR00082. rbfA. 1 hit.
PROSITE	PS01319. RBFA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RBFA_RICPU

Accession

Primary (citable) accession number: C4K0J6

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 22, 2009
Last sequence update:	July 7, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program