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C4JZ80

- C4JZ80_UNCRE

UniProt

C4JZ80 - C4JZ80_UNCRE

Protein

DNA ligase

Gene

UREG_07481

Organism
Uncinocarpus reesii (strain UAMH 1704)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (07 Jul 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:UREG_07481Imported
    OrganismiUncinocarpus reesii (strain UAMH 1704)Imported
    Taxonomic identifieri336963 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeOnygenalesOnygenaceaeUncinocarpus
    ProteomesiUP000002058: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliC4JZ80.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    KOiK10747.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C4JZ80-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPNPASKRKR DDASDSKSFR SIDSFFRSPK KRQPQVDICT PAPPGNQALT    50
    DEELARKLQA EWDRDAAPSR DGPHTEANTQ AALLPQSVER KGDLQIADSP 100
    PKTSGVVPEK KTKGVLSLQT SATTEDTISM SLPLDQPPLS FKPSTYIEQL 150
    REFWGLEGGR ASYSILARAF SLVNSTQSRI KIVDILVNLL RILIEGNPDS 200
    LLPAVWLATN AFAPPYVPLE LGLGGSAISK ALKKAYGLDN LGLKSLYDKH 250
    GDAGDVAYEA KKKQSFTLRR PKPLSIKGVY DSLTGIANSK GTGSQENKQR 300
    IVEQLLRDAR GAEESRYIVR TLVQHLRIGA VRTTMLIALA RAFLYSRPPS 350
    ATFEVYLQPD LMNLKKDELS NLYARAEEIV KASYARHPNY NDLIPCLLET 400
    GISKAVLAKC GLSLHIPLLP MLGSITRDLT EMLTKLQGKK FSCEYKYDGQ 450
    RAQVHCDTAG KVSLFSRHLE FMTDKYPDLV SLVPQIRGDG VSSFILEGEV 500
    VAVDQESGDL LPFQTLSNRA KKNVEMSNIK INVCLFAFDL MYLNGEPLLE 550
    RSFRERRELL RSLFVEIPKR FSWVKSIDAT STDSDMILNF FREATKEKCE 600
    GIMVKVLDTD VEAVETVGLG SAIKESSNIA KEKQKGTRKR ALLSTYEPDK 650
    RLESWLKVKK DYSTASDTLD LIPIAGWHGQ GRKAKWWSPI LLAVRNPETG 700
    SLEAVTKCMS GFTDKFYQEN KEKYAEHGDN VISRPSYVDY RNEPEVWFEP 750
    QEVWEVAFAD ITLSPTYTAA IGLVSEERGL SLRFPRFLRV REDKTIEEAS 800
    TSAYLAELWR KQSARLQIEG VDSMQEEP 828
    Length:828
    Mass (Da):92,694
    Last modified:July 7, 2009 - v1
    Checksum:i6FD6603C0F7026C0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476619 Genomic DNA. Translation: EEP82616.1.
    RefSeqiXP_002582708.1. XM_002582662.1.

    Genome annotation databases

    GeneIDi8439949.
    KEGGiure:UREG_07481.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476619 Genomic DNA. Translation: EEP82616.1 .
    RefSeqi XP_002582708.1. XM_002582662.1.

    3D structure databases

    ProteinModelPortali C4JZ80.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 8439949.
    KEGGi ure:UREG_07481.

    Phylogenomic databases

    KOi K10747.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: UAMH 1704Imported.

    Entry informationi

    Entry nameiC4JZ80_UNCRE
    AccessioniPrimary (citable) accession number: C4JZ80
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 7, 2009
    Last sequence update: July 7, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3