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C4JZ80 (C4JZ80_UNCRE) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length828 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
C4JZ80 [UniParc].

Last modified July 7, 2009. Version 1.
Checksum: 6FD6603C0F7026C0

FASTA82892,694
        10         20         30         40         50         60 
MPNPASKRKR DDASDSKSFR SIDSFFRSPK KRQPQVDICT PAPPGNQALT DEELARKLQA 

        70         80         90        100        110        120 
EWDRDAAPSR DGPHTEANTQ AALLPQSVER KGDLQIADSP PKTSGVVPEK KTKGVLSLQT 

       130        140        150        160        170        180 
SATTEDTISM SLPLDQPPLS FKPSTYIEQL REFWGLEGGR ASYSILARAF SLVNSTQSRI 

       190        200        210        220        230        240 
KIVDILVNLL RILIEGNPDS LLPAVWLATN AFAPPYVPLE LGLGGSAISK ALKKAYGLDN 

       250        260        270        280        290        300 
LGLKSLYDKH GDAGDVAYEA KKKQSFTLRR PKPLSIKGVY DSLTGIANSK GTGSQENKQR 

       310        320        330        340        350        360 
IVEQLLRDAR GAEESRYIVR TLVQHLRIGA VRTTMLIALA RAFLYSRPPS ATFEVYLQPD 

       370        380        390        400        410        420 
LMNLKKDELS NLYARAEEIV KASYARHPNY NDLIPCLLET GISKAVLAKC GLSLHIPLLP 

       430        440        450        460        470        480 
MLGSITRDLT EMLTKLQGKK FSCEYKYDGQ RAQVHCDTAG KVSLFSRHLE FMTDKYPDLV 

       490        500        510        520        530        540 
SLVPQIRGDG VSSFILEGEV VAVDQESGDL LPFQTLSNRA KKNVEMSNIK INVCLFAFDL 

       550        560        570        580        590        600 
MYLNGEPLLE RSFRERRELL RSLFVEIPKR FSWVKSIDAT STDSDMILNF FREATKEKCE 

       610        620        630        640        650        660 
GIMVKVLDTD VEAVETVGLG SAIKESSNIA KEKQKGTRKR ALLSTYEPDK RLESWLKVKK 

       670        680        690        700        710        720 
DYSTASDTLD LIPIAGWHGQ GRKAKWWSPI LLAVRNPETG SLEAVTKCMS GFTDKFYQEN 

       730        740        750        760        770        780 
KEKYAEHGDN VISRPSYVDY RNEPEVWFEP QEVWEVAFAD ITLSPTYTAA IGLVSEERGL 

       790        800        810        820 
SLRFPRFLRV REDKTIEEAS TSAYLAELWR KQSARLQIEG VDSMQEEP 

« Hide

References

[1]"Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives."
Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R., Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y., McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M., Barker B.M., Galgiani J.N. expand/collapse author list , Orbach M.J., Kirkland T.N., Cole G.T., Henn M.R., Birren B.W., Taylor J.W.
Genome Res. 19:1722-1731(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UAMH 1704.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH476619 Genomic DNA. Translation: EEP82616.1.
RefSeqXP_002582708.1. XM_002582662.1.

3D structure databases

ProteinModelPortalC4JZ80.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8439949.
KEGGure:UREG_07481.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC4JZ80_UNCRE
AccessionPrimary (citable) accession number: C4JZ80
Entry history
Integrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)