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C4JRH4

- C4JRH4_UNCRE

UniProt

C4JRH4 - C4JRH4_UNCRE

Protein

DNA ligase

Gene

UREG_05063

Organism
Uncinocarpus reesii (strain UAMH 1704)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (07 Jul 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:UREG_05063Imported
    OrganismiUncinocarpus reesii (strain UAMH 1704)Imported
    Taxonomic identifieri336963 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeOnygenalesOnygenaceaeUncinocarpus
    ProteomesiUP000002058: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10777.
    OrthoDBiEOG7QC84G.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 2 hits.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C4JRH4-1 [UniParc]FASTAAdd to Basket

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    MDGLNGPKGE TEQELDEKYP NRPRNHHPTL PFHDLFLDLF NPLNENKKRP     50
    AGSTVARRKL GPHGGQQTLS PQELRRDIIQ RFISKWRNEV GDDIYPAFRL 100
    IIPEKDRDRA MYGLKEKTIG KLLVKIMKID KNSEDGFNLL NWKLPGQSMA 150
    SRMAGDFAGR CYEVISKRPM RTEVGNMTVQ EVNEKLDLLA AANKEDEQLP 200
    ILEDFYRKMN PEELLWLIRI ILRQMKVGAT ERTFFEIWHP DAETLFSISS 250
    SLRRVCWELY NPNVRLEDEE TGVTLMQCFQ PQLAQFQMHS FQRMIEKMRL 300
    SPEDPSFWIE EKMDGERMQL HMMSDDSITG GKRFKFWSRK AKDYTYLYGN 350
    GFYDENGALT RHLKDAFADG VQNIILDGEM ITWDPEQDAP VPFGTLKTAA 400
    LSEQRNPFSA TGQRPLFRAF DILYLNDKAL TRYTLRDRRK ALEASIKPVH 450
    RRFEIHTYEV GYSAAHIEPQ LRKVVAEASE GLVLKNPDSP YRLNERHDDW 500
    MKVKPEYMTE FGESLDCVVI GGYYGSGKRG GALATFLCGL RVDEAQIRQG 550
    ANPMKCYSFC KVGGGFTAAD YANVRHHTDS KWKDWDPKKP PTEFIELAGG 600
    DAQYERPDVW IRPDESVVLC VKASSVTPSD QFRLGLTVRF PRFKRLRMDK 650
    TWESALSIQE FMDLKSNAER EQKEKEFKID NSRKRKPKRT TKKPLTIAGY 700
    DENKKAEFDV SDQIFTSKSD SLVVMTDALE PEKKSKLELE KLIKANGGKI 750
    YQTNTAASNT ICIAERRTVK VASIQKAAKE NIVRPSWLLD CIKQNEADLG 800
    LPDLLLPLEP RHMYFTVKGQ EQEISSNVDQ YSDSYVRDTT TKELTKLLAS 850
    MPAISNLSAS RISKIEDQMQ SRHEQEGTFH DLPGWLFKNQ VLYFSQSRSS 900
    SDSKVSSSRL ASNIARFAGA SLVSKPDDKR VTHIILDKDS RSADVSALRS 950
    SISKRVGAGR IPHIVTVEWI NESWKAKTLL DEEQLLKGVH FEFRKVCIDA 1000
    FYRSHISVS 1009
    Length:1,009
    Mass (Da):115,751
    Last modified:July 7, 2009 - v1
    Checksum:i2049706A9DECD153
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476617 Genomic DNA. Translation: EEP80221.1.
    RefSeqiXP_002584374.1. XM_002584328.1.

    Genome annotation databases

    GeneIDi8443373.
    KEGGiure:UREG_05063.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476617 Genomic DNA. Translation: EEP80221.1 .
    RefSeqi XP_002584374.1. XM_002584328.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 8443373.
    KEGGi ure:UREG_05063.

    Phylogenomic databases

    KOi K10777.
    OrthoDBi EOG7QC84G.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 2 hits.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: UAMH 1704Imported.

    Entry informationi

    Entry nameiC4JRH4_UNCRE
    AccessioniPrimary (citable) accession number: C4JRH4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 7, 2009
    Last sequence update: July 7, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3