C3ZXB6 (C3ZXB6_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN42796.1

Gene names

ORF Names:

BRAFLDRAFT_243162 EMBL EEN42796.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	370 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	GPI anchor biosynthetic process Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	370	1	EMBL EEN42796.1

Sequences

	Sequence		Length	Mass (Da)
	C3ZXB6 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: DEAF569A69145149	FASTA	370	41,429
	10 20 30 40 50 60 MVHHVCMVSD FFFPNTGGVE SHIYQLSQCL LQRGHKAIVI THAYGRRTGV RYLTNNLKVY 70 80 90 100 110 120 YLPLLVAYNQ CILPTLFATL PIVRYILLRE RITIVHGHSA FSALAHEAMF HASTMGISTV 130 140 150 160 170 180 FTDHSLFGFA DASSIITNKI LKFSLADVQH VICVSHTSKE NTVLRAALSP HKVYVVPNAV 190 200 210 220 230 240 DSTVFTPDPS QQRSDRVTVV VMSRLVYRKG IDLLAGIIPE LCGRHPDVHF LIGGDGPKRI 250 260 270 280 290 300 LLEEVREQYQ LHDRVQLLGS VSHEDVRDIL VQGDIFLNTS LTEAFCIAIV EAESCGLQVV 310 320 330 340 350 360 STRIGGVPEV LPDELIYLAE PSVASLLVAL ETAVDDKRRG WTISPRERHE RISTMYTWQD 370 VARRTETVYD

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN42796.1. Tissue: Testes EMBL EEN42796.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666710 Genomic DNA. Translation: EEN42796.1.
RefSeq	XP_002586785.1. XM_002586739.1.
3D structure databases
ProteinModelPortal	C3ZXB6.
ModBase	Search...
Protein-protein interaction databases
STRING	C3ZXB6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7209613.
KEGG	bfo:BRAFLDRAFT_243162.
Phylogenomic databases
OMA	HGHSAFS.
PhylomeDB	C3ZXB6.
Family and domain databases
InterPro	IPR001296. Glyco_trans_1. IPR013234. PIGA_GPI_anchor_biosynthesis. [Graphical view]
KO	K03857.
Pfam	PF00534. Glycos_transf_1. 1 hit. PF08288. PIGA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3ZXB6_BRAFL

Accession

Primary (citable) accession number: C3ZXB6

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)