C3ZQP8 (C3ZQP8_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribosomal protein L19 RuleBase RU000574

Gene names

ORF Names:

BRAFLDRAFT_120900 EMBL EEN45094.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	198 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L19e family. RuleBase RU000574

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000574
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3ZQP8 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: CB016F08F3A2958C	FASTA	198	23,440
	10 20 30 40 50 60 MSSTLRLQKR LSASVLKCGK NKVWLDPNET NEIANANSRQ NIRKLVKDGL IIRKPVAVHS 70 80 90 100 110 120 RARVRKAHIA RRKGRHMGYG KRKGTANARM PEKVIWMRRM RVLRRMLRKY RESKKIDKHL 130 140 150 160 170 180 YHQLYMKAKG NVFKNKRLMM EYIHKRKAEK QRSKLLADQA EARRSKNKDK RARREERLAA 190 KRAEILKAYT GEEATKKA

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN45094.1. Tissue: Testes EMBL EEN45094.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666662 Genomic DNA. Translation: EEN45094.1.
RefSeq	XP_002589083.1. XM_002589037.1.
UniGene	Bfl.8391.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C3ZQP8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7236826.
KEGG	bfo:BRAFLDRAFT_120900.
Phylogenomic databases
OMA	AGKIDKH.
Family and domain databases
InterPro	IPR000196. Ribosomal_L19/L19e. IPR023638. Ribosomal_L19/L19e_CS. IPR015972. Ribosomal_L19/L19e_dom1. IPR015974. Ribosomal_L19/L19e_dom3. [Graphical view]
Gene3D	G3DSA:1.10.1650.10. Ribosomal_L19/L19e_dom1. 1 hit. G3DSA:1.10.1200.60. Ribosomal_L19/L19e_dom3. 1 hit.
KO	K02885.
Pfam	PF01280. Ribosomal_L19e. 1 hit. [Graphical view]
SUPFAM	SSF48140. Ribosomal_L19/L19e. 1 hit.
PROSITE	PS00526. RIBOSOMAL_L19E. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3ZQP8_BRAFL

Accession

Primary (citable) accession number: C3ZQP8

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	November 16, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)