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Protein
Submitted name:

Uncharacterized protein

Gene

BRAFLDRAFT_121413

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:BRAFLDRAFT_121413Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
Proteomesi
  • UP000001554 Componenti: Partially assembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI289980.

Structurei

3D structure databases

ProteinModelPortaliC3ZME5.
SMRiC3ZME5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585. Eukaryota.
ENOG410XSTS. LUCA.
InParanoidiC3ZME5.
KOiK10172.
OMAiPLWEKFK.

Family and domain databases

CDDicd00182. TBOX. 1 hit.
Gene3Di2.60.40.820. 1 hit.
InterProiView protein in InterPro
IPR008967. p53-like_TF_DNA-bd.
IPR036960. T-box_sf.
IPR002070. TF_Brachyury.
IPR001699. TF_T-box.
IPR018186. TF_T-box_CS.
PANTHERiPTHR11267. PTHR11267. 1 hit.
PfamiView protein in Pfam
PF00907. T-box. 1 hit.
PRINTSiPR00938. BRACHYURY.
PR00937. TBOX.
SMARTiView protein in SMART
SM00425. TBOX. 1 hit.
SUPFAMiSSF49417. SSF49417. 1 hit.
PROSITEiView protein in PROSITE
PS01283. TBOX_1. 1 hit.
PS01264. TBOX_2. 1 hit.
PS50252. TBOX_3. 1 hit.

Sequencei

Sequence statusi: Complete.

C3ZME5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQTPDQFSV SHLLSAVESE ISAGSEKGDP TERDLKVTLG EKPLWEKFKS
60 70 80 90 100
LTNEMIVTKS GRRMFPVLKV NVSGLDPNAM YSFLLDFTAA DNHRWKYVNG
110 120 130 140 150
EWVPGGKPEP SVPSCVYIHP DSPNFGAHWM KSPVSFSKVK LTNKLNGGGQ
160 170 180 190 200
QIMLNSLHKY EPRIHIVKVG GPDNQRTLST HTFAETQFIA VTAYQNEELT
210 220 230 240 250
ALKIKHNPFA KAFLDAKERN DTKSGHDDLT DQQPQFSQLG GWFLPGTGPI
260 270 280 290 300
CPPPNPHQFA PSLGLPSHGC DRYSTLRNHR SAPYPHPYQR SSPPTNYGHD
310 320 330 340 350
TAASLPMMPT HDNWSGLPVS THNMLSMSAM PHTTTSTHAQ YPNLWSVSNN
360 370 380 390 400
NLTPTTHAQT HMSGTMGTGL PHQFLRTTAP APYHSIPTCT VPTTASSSPV
410 420 430 440
YHDSHEVSST DSGYGHSTTP PAPQTRITSN NWSPMTMPSM
Length:440
Mass (Da):48,469
Last modified:July 28, 2009 - v1
Checksum:iF12EBC417243D3D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666644 Genomic DNA. Translation: EEN46401.1.
RefSeqiXP_002590390.1. XM_002590344.1.
UniGeneiBfl.10660.

Genome annotation databases

GeneIDi7208653.
KEGGibfo:BRAFLDRAFT_121413.

Similar proteinsi

Entry informationi

Entry nameiC3ZME5_BRAFL
AccessioniPrimary (citable) accession number: C3ZME5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: October 25, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Keywords - Technical termi

Complete proteome, Reference proteomeImported