Uncharacterized protein - Branchiostoma floridae (Florida lancelet)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL EEN47579.1

Gene names

Name:	SUFU EMBL EEN47579.1
ORF Names:	BRAFLDRAFT_105101 EMBL EEN47579.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome] EMBL EEN47579.1

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	1088 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU004468 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

C3ZIP4 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 2EFFAD2DAE85C1EF
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FASTA

1,088

123,465

        10         20         30         40         50         60 
MLSLLTTSLL LGFTCGAVYD YGAYNRTRDN FRPGTFPDDF IWSTATASYQ IEGAWNVDGK 

        70         80         90        100        110        120 
GESIWDRFSH TPGKVDRGDT GDVACDSYNK YREDVQLMKA MGLKYYRFSL SWPRIFPDGT 

       130        140        150        160        170        180 
VAGGVNQAGV DYYNNVIDEL LANGITPMVT LYHWDLPQAL QDRYGGWVNE ELVRHFNDYA 

       190        200        210        220        230        240 
DFVFQTFGDR VTYWITFNEP WVVCFLGYGT GGNAPGIQDS GNSTYLCGHT ILKAHAEAWH 

       250        260        270        280        290        300 
TYDTTYRRSQ QGQISITLNC DWPEPRDPDS PADVAAADRY IQFYIGWFAH PIYSAAGDYP 

       310        320        330        340        350        360 
AAMKDIIREK SLAEGLQESR LPQFTPAEID RIKGTGDFFG LNHYTARIIQ NRVDPTDTPG 

       370        380        390        400        410        420 
YSNDRNLSES TAPEWPRAAS EWLYVVPWGL RRLLKFIKLN YGDPDVFITE NGRSDHDEQP 

       430        440        450        460        470        480 
PVMEDADRIC YYMGYIDEVL KAIEVDGVKV RAYTAWSLMD NFEWSRGYTE RFGLHYVNFT 

       490        500        510        520        530        540 
DPRRPRVPKE SAGFYSDIIA NNGFPEGADV TTMVRSRLLQ SYLGTAGLTR VLVKMSGTML 

       550        560        570        580        590        600 
GLFATSLLLG LVWGAEYNYG AYDHSRDAFR PGRFPDGFIW STATASYQIE GGWEADGKGE 

       610        620        630        640        650        660 
SIWDRFSHTP GKVDRGDTGD VACDSYNKYR EDVQLMTDLG LKYYRFSLSW TRIFPDGTLA 

       670        680        690        700        710        720 
SGPNEAGVAY YNNLIDELVR NGVTPMVTLY HWDLPQNLQD TYGGWVSQGI VKHFNDYATF 

       730        740        750        760        770        780 
AFQTFGDRVR YWITFNEPWV VCYIGYGTGE HAPGIQDERN STYLCGHNIL KAHANAWHTY 

       790        800        810        820        830        840 
DTGFRQSQGG QVGITLNSDW AEPRDPDLDA DVIATDRYLQ FYLGWFANPI YSVGGDYPVV 

       850        860        870        880        890        900 
MKEAVLAKSQ AEGLRESRLP QFTQEEVEYI RGTSDFFGLN HYTTRIIADN VVVGAAPGYA 

       910        920        930        940        950        960 
NDRDIAQYTA PEWSRAESEW LYEVPWGLRR LLNFIKLNYG DPEVLVTENG RSDGDVTPPL 

       970        980        990       1000       1010       1020 
MVDTCRICYY MTYIDEVLKA IDLDGVKVRA YTAWSLMDNF EWARGYTERF GLHYVDFNDL 

      1030       1040       1050       1060       1070       1080 
NRPRTPKESA GFFKDVIANN GFPEGADVTR MVQDMWRDCR GAGAKSHADI ALLALAFIIT 


AMYNLVYM

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References

[1]

"The amphioxus genome and the evolution of the chordate karyotype."
US DOE Joint Genome Institute (JGI-PGF)
Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J.

Rokhsar D.S.
Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S238N-H82 EMBL EEN47579.1.
Tissue: Testes EMBL EEN47579.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666628 Genomic DNA. Translation: EEN47579.1.
RefSeq	XP_002591568.1. XM_002591522.1.
3D structure databases
ProteinModelPortal	C3ZIP4.
ModBase	Search...
Protein-protein interaction databases
STRING	7739.JGI105101.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7219802.
KEGG	bfo:BRAFLDRAFT_105101.
Organism-specific databases
CTD	51684.
Phylogenomic databases
KO	K01229.
OMA	CMFSYEY.
Family and domain databases
Gene3D	3.20.20.80. 2 hits.
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
PANTHER	PTHR10353. PTHR10353. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 2 hits. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 2 hits.
PROSITE	PS00572. GLYCOSYL_HYDROL_F1_1. 2 hits. PS00653. GLYCOSYL_HYDROL_F1_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3ZIP4_BRAFL

Accession

Primary (citable) accession number: C3ZIP4

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Family and domain databases

Entry information