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Protein
Submitted name:

Putative uncharacterized protein

Gene

BRAFLDRAFT_59477

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:BRAFLDRAFT_59477Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
ProteomesiUP000001554 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI59477.

Structurei

3D structure databases

ProteinModelPortaliC3ZH05.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
InParanoidiC3ZH05.
KOiK01580.
OMAiEYLYTKI.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3ZH05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNVYRHVFM RMSRPDSCRQ VRVALLCGFQ MVQPQYLLPT RNAPATTTLF
60 70 80 90 100
LTKVVEILCD YVRKTYDRSE KVVDFHHPQD LKKFLDLEIP DERPETLEKI
110 120 130 140 150
LESCRETLKY GVKTGHPRFF NQLSSGMDVI SLAGEWLTAT ANTNMFTYEI
160 170 180 190 200
APVFIVMEEM ILKKMREIIG FPAKSGDGIF SPGGAISNLY AVNCARYKFV
210 220 230 240 250
PDVKKKGLRE APKLVMYISE HSHYSLKRAA AIVGIGTDNV YAVKCDDRGK
260 270 280 290 300
MIPSDLERKI QIAKSKGETP FFVSASGGST VYGAFDPLHD LADICQRHKM
310 320 330 340 350
WLHVDCAWGG GVLLSKKYRK RLDGIERADS VTWNPHKLMG VILQCSCLLL
360 370 380 390 400
KESNLLQRCN SMCADYLFQQ DKNYDVSYDT GDKTIQCGRH VDVFKLWLMW
410 420 430 440 450
RAKATVGFEA QINKCFDLAH YMTDKLKARE GFEMVVDEPE LTNICFWYLP
460 470 480 490 500
PSIRDLPDGP DKRDRLAQVA PVVKARMMDR GMTMIGYQPL GDNVNFFRMV
510 520
ISNPAATTAD IDYMIEEIER LGQDL
Length:525
Mass (Da):59,826
Last modified:July 28, 2009 - v1
Checksum:iB6A32D2E14FFCB21
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666621 Genomic DNA. Translation: EEN48152.1.
RefSeqiXP_002592141.1. XM_002592095.1.

Genome annotation databases

GeneIDi7243923.
KEGGibfo:BRAFLDRAFT_59477.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666621 Genomic DNA. Translation: EEN48152.1.
RefSeqiXP_002592141.1. XM_002592095.1.

3D structure databases

ProteinModelPortaliC3ZH05.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7739.JGI59477.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7243923.
KEGGibfo:BRAFLDRAFT_59477.

Phylogenomic databases

eggNOGiCOG0076.
InParanoidiC3ZH05.
KOiK01580.
OMAiEYLYTKI.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S238N-H82Imported.
    Tissue: TestesImported.

Entry informationi

Entry nameiC3ZH05_BRAFL
AccessioniPrimary (citable) accession number: C3ZH05
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: January 7, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.