C3ZAH6 (C3ZAH6_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN50379.1

Gene names

ORF Names:

BRAFLDRAFT_208982 EMBL EEN50379.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	453 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU003693
Sequence similarities	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003693

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003693
Molecular function	Transferase RuleBase RU003693
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	tetrapyrrole biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	5-aminolevulinate synthase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring nitrogenous groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEN50379.1

Sequences

	Sequence		Length	Mass (Da)
	C3ZAH6 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 4811C0650CDA1E0D	FASTA	453	50,103
	10 20 30 40 50 60 FPSGDGTFNY DKFLKGEIEK KKKDHTYRVF KRVNRRAPFP FAENYSEGSH PGEDVSVWCS 70 80 90 100 110 120 NDYLGMSRHP KVVETIVDTV NRRGAGAGGT RNISGNSMYH VELENELADL HQKEAALLFT 130 140 150 160 170 180 SCYVANDSTL FTLARALPGC EIYSDAGNHA SMIQGIKNSG QPKFIFKHND PIHLEELLKK 190 200 210 220 230 240 SDPATPKIVA FETVHSMDGA VCPLNELCDV AHKYGAITFI DEVHAVGLYG TRGGGIGDRD 250 260 270 280 290 300 GLLPKMDIIS GTLGKAFGLI GGYIAGSSLL VDMIRSYAAG FIFTTALPPM VLAGALASVR 310 320 330 340 350 360 ILKSEEGVQL RRGHQRAVKL MRTMLMDAGL PVVHCPSHII PVKVGDAAKN TDVCNDMMTK 370 380 390 400 410 420 HKIYVQAINY PTVPRGEEML RIAPSPHHTP EMMKYFVDAL AKEWKEHDLA FEKHSDVECH 430 440 450 FCKMPIHFEI MSAREKEYFA DFAQSNNRVT AQA

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN50379.1. Tissue: Testes EMBL EEN50379.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666602 Genomic DNA. Translation: EEN50379.1.
RefSeq	XP_002594368.1. XM_002594322.1.
UniGene	Bfl.24434.
3D structure databases
ProteinModelPortal	C3ZAH6.
ModBase	Search...
Protein-protein interaction databases
STRING	C3ZAH6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7225051.
KEGG	bfo:BRAFLDRAFT_208982.
Phylogenomic databases
OMA	CPFLARM.
PhylomeDB	C3ZAH6.
Family and domain databases
InterPro	IPR010961. 4pyrrol_synth_NH2levulA_synth. IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00643.
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01821. 5aminolev_synth. 1 hit.
PROSITE	PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3ZAH6_BRAFL

Accession

Primary (citable) accession number: C3ZAH6

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)