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Protein

Alpha-amylase

Gene

BRAFLDRAFT_77551

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processCarbohydrate metabolismSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseSAAS annotation (EC:3.2.1.1SAAS annotation)
Gene namesi
ORF Names:BRAFLDRAFT_77551Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
Proteomesi
  • UP000001554 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI77551

Structurei

3D structure databases

ProteinModelPortaliC3ZA03
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini149 – 238Aamy_CInterPro annotationAdd BLAST90
Domaini316 – 602AamyInterPro annotationAdd BLAST287

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG2212 Eukaryota
COG0366 LUCA
InParanoidiC3ZA03
KOiK01176
OMAiRVIAIPY

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR006048 A-amylase/branching_C
IPR031319 A-amylase_C
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF02806 Alpha-amylase_C, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00632 Aamy_C, 1 hit
SUPFAMiSSF51445 SSF51445, 3 hits

Sequencei

Sequence statusi: Complete.

C3ZA03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLGHIFRKQ YGQKLVYLDS FGEGWGMLSD NNALVFVDNH DNQRGHGGGG
60 70 80 90 100
KSILTFRDSR LYKMANAFML AFPYGFVRMM SSYYWDQWWE GGKDKNDWIG
110 120 130 140 150
PPADRSGNTM GVSINNKGNC RNGWICEHRW RSNRNMVRFR NVAAGHGMFN
160 170 180 190 200
WWDNGNNQIA FSRGDRAFIA INNEDRSALN ATLQTGLSSG DYCDVISGDL
210 220 230 240 250
SNGFCTGKTI TVGWDGRAHI YIAVDDEDPI IAIHVGSKVC RGNGIDQGVI
260 270 280 290 300
DPVDLVHPNP VSPTGTERTV VFINKQTLVG QDLFLRGGIG HEGRPGCTRD
310 320 330 340 350
AVSSQCAIPI SHRIGGTNTN LNSWKQGDNH LDWYGVECGQ VSPPNENRVI
360 370 380 390 400
AIPYRPWWER YQPISYHLNT RSGNDEDFRD MVHRCNQQGV RIYADVVINH
410 420 430 440 450
MCGFGGSGHG TGGSYFNAEN LDFPAVPYGS NDFNNCSTCG TSDCKVQSYD
460 470 480 490 500
DVNQVSPPNE NRVIAIPYRP WWERYQPISY HLNTRSGNDE DFRDMVHRCN
510 520 530 540 550
QQGVRVCVSL KPPATFGSCP KLLTTFLLHF NPSLRPKELR AQGSPLVWTT
560 570 580 590 600
NNPNNAATVN SQGYGYTPLN QWGDHYWMLD VDMDCSRTEY GWFEVKAMTI
610 620 630 640 650
VRYPGGGVQW ESDRNQGTCG GTAGGTKPYS SGNHFARCGK INAFDFDGNA

CTINEF
Length:656
Mass (Da):73,369
Last modified:July 28, 2009 - v1
Checksum:iF89C231CD404075B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666601 Genomic DNA Translation: EEN50591.1
RefSeqiXP_002594580.1, XM_002594534.1

Genome annotation databases

GeneIDi7211267
KEGGibfo:BRAFLDRAFT_77551

Entry informationi

Entry nameiC3ZA03_BRAFL
AccessioniPrimary (citable) accession number: C3ZA03
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: February 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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