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Protein

Alpha-amylase

Gene

BRAFLDRAFT_77551

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseSAAS annotation, Hydrolase

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseSAAS annotation (EC:3.2.1.1SAAS annotation)
Gene namesi
ORF Names:BRAFLDRAFT_77551Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
Proteomesi
  • UP000001554 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI77551.

Structurei

3D structure databases

ProteinModelPortaliC3ZA03.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini149 – 238Aamy_CInterPro annotationAdd BLAST90
Domaini316 – 602AamyInterPro annotationAdd BLAST287

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG2212. Eukaryota.
COG0366. LUCA.
InParanoidiC3ZA03.
KOiK01176.
OMAiRVIAIPY.

Family and domain databases

InterProiView protein in InterPro
IPR006048. A-amylase/branching_C.
IPR031319. A-amylase_C.
IPR006046. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF02806. Alpha-amylase_C. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SUPFAMiSSF51445. SSF51445. 3 hits.

Sequencei

Sequence statusi: Complete.

C3ZA03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLGHIFRKQ YGQKLVYLDS FGEGWGMLSD NNALVFVDNH DNQRGHGGGG
60 70 80 90 100
KSILTFRDSR LYKMANAFML AFPYGFVRMM SSYYWDQWWE GGKDKNDWIG
110 120 130 140 150
PPADRSGNTM GVSINNKGNC RNGWICEHRW RSNRNMVRFR NVAAGHGMFN
160 170 180 190 200
WWDNGNNQIA FSRGDRAFIA INNEDRSALN ATLQTGLSSG DYCDVISGDL
210 220 230 240 250
SNGFCTGKTI TVGWDGRAHI YIAVDDEDPI IAIHVGSKVC RGNGIDQGVI
260 270 280 290 300
DPVDLVHPNP VSPTGTERTV VFINKQTLVG QDLFLRGGIG HEGRPGCTRD
310 320 330 340 350
AVSSQCAIPI SHRIGGTNTN LNSWKQGDNH LDWYGVECGQ VSPPNENRVI
360 370 380 390 400
AIPYRPWWER YQPISYHLNT RSGNDEDFRD MVHRCNQQGV RIYADVVINH
410 420 430 440 450
MCGFGGSGHG TGGSYFNAEN LDFPAVPYGS NDFNNCSTCG TSDCKVQSYD
460 470 480 490 500
DVNQVSPPNE NRVIAIPYRP WWERYQPISY HLNTRSGNDE DFRDMVHRCN
510 520 530 540 550
QQGVRVCVSL KPPATFGSCP KLLTTFLLHF NPSLRPKELR AQGSPLVWTT
560 570 580 590 600
NNPNNAATVN SQGYGYTPLN QWGDHYWMLD VDMDCSRTEY GWFEVKAMTI
610 620 630 640 650
VRYPGGGVQW ESDRNQGTCG GTAGGTKPYS SGNHFARCGK INAFDFDGNA

CTINEF
Length:656
Mass (Da):73,369
Last modified:July 28, 2009 - v1
Checksum:iF89C231CD404075B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666601 Genomic DNA. Translation: EEN50591.1.
RefSeqiXP_002594580.1. XM_002594534.1.

Genome annotation databases

GeneIDi7211267.
KEGGibfo:BRAFLDRAFT_77551.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiC3ZA03_BRAFL
AccessioniPrimary (citable) accession number: C3ZA03
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 5, 2017
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported