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C3ZA03

- C3ZA03_BRAFL

UniProt

C3ZA03 - C3ZA03_BRAFL

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Protein
Alpha-amylase
Gene
BRAFLDRAFT_77551
Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:BRAFLDRAFT_77551Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
ProteomesiUP000001554: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI77551.

Structurei

3D structure databases

ProteinModelPortaliC3ZA03.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
KOiK01176.
OMAiRVIAIPY.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 3 hits.

Sequencei

Sequence statusi: Complete.

C3ZA03-1 [UniParc]FASTAAdd to Basket

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MQLGHIFRKQ YGQKLVYLDS FGEGWGMLSD NNALVFVDNH DNQRGHGGGG    50
KSILTFRDSR LYKMANAFML AFPYGFVRMM SSYYWDQWWE GGKDKNDWIG 100
PPADRSGNTM GVSINNKGNC RNGWICEHRW RSNRNMVRFR NVAAGHGMFN 150
WWDNGNNQIA FSRGDRAFIA INNEDRSALN ATLQTGLSSG DYCDVISGDL 200
SNGFCTGKTI TVGWDGRAHI YIAVDDEDPI IAIHVGSKVC RGNGIDQGVI 250
DPVDLVHPNP VSPTGTERTV VFINKQTLVG QDLFLRGGIG HEGRPGCTRD 300
AVSSQCAIPI SHRIGGTNTN LNSWKQGDNH LDWYGVECGQ VSPPNENRVI 350
AIPYRPWWER YQPISYHLNT RSGNDEDFRD MVHRCNQQGV RIYADVVINH 400
MCGFGGSGHG TGGSYFNAEN LDFPAVPYGS NDFNNCSTCG TSDCKVQSYD 450
DVNQVSPPNE NRVIAIPYRP WWERYQPISY HLNTRSGNDE DFRDMVHRCN 500
QQGVRVCVSL KPPATFGSCP KLLTTFLLHF NPSLRPKELR AQGSPLVWTT 550
NNPNNAATVN SQGYGYTPLN QWGDHYWMLD VDMDCSRTEY GWFEVKAMTI 600
VRYPGGGVQW ESDRNQGTCG GTAGGTKPYS SGNHFARCGK INAFDFDGNA 650
CTINEF 656
Length:656
Mass (Da):73,369
Last modified:July 28, 2009 - v1
Checksum:iF89C231CD404075B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG666601 Genomic DNA. Translation: EEN50591.1.
RefSeqiXP_002594580.1. XM_002594534.1.

Genome annotation databases

GeneIDi7211267.
KEGGibfo:BRAFLDRAFT_77551.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG666601 Genomic DNA. Translation: EEN50591.1 .
RefSeqi XP_002594580.1. XM_002594534.1.

3D structure databases

ProteinModelPortali C3ZA03.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7739.JGI77551.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7211267.
KEGGi bfo:BRAFLDRAFT_77551.

Phylogenomic databases

eggNOGi COG0366.
KOi K01176.
OMAi RVIAIPY.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00632. Aamy_C. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 3 hits.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S238N-H82Imported.
    Tissue: TestesImported.

Entry informationi

Entry nameiC3ZA03_BRAFL
AccessioniPrimary (citable) accession number: C3ZA03
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: September 3, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3