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C3ZA03

- C3ZA03_BRAFL

UniProt

C3ZA03 - C3ZA03_BRAFL

Protein

Alpha-amylase

Gene

BRAFLDRAFT_77551

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:BRAFLDRAFT_77551Imported
    OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
    Taxonomic identifieri7739 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
    ProteomesiUP000001554: Partially assembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi7739.JGI77551.

    Structurei

    3D structure databases

    ProteinModelPortaliC3ZA03.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    KOiK01176.
    OMAiRVIAIPY.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00632. Aamy_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 3 hits.

    Sequencei

    Sequence statusi: Complete.

    C3ZA03-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLGHIFRKQ YGQKLVYLDS FGEGWGMLSD NNALVFVDNH DNQRGHGGGG    50
    KSILTFRDSR LYKMANAFML AFPYGFVRMM SSYYWDQWWE GGKDKNDWIG 100
    PPADRSGNTM GVSINNKGNC RNGWICEHRW RSNRNMVRFR NVAAGHGMFN 150
    WWDNGNNQIA FSRGDRAFIA INNEDRSALN ATLQTGLSSG DYCDVISGDL 200
    SNGFCTGKTI TVGWDGRAHI YIAVDDEDPI IAIHVGSKVC RGNGIDQGVI 250
    DPVDLVHPNP VSPTGTERTV VFINKQTLVG QDLFLRGGIG HEGRPGCTRD 300
    AVSSQCAIPI SHRIGGTNTN LNSWKQGDNH LDWYGVECGQ VSPPNENRVI 350
    AIPYRPWWER YQPISYHLNT RSGNDEDFRD MVHRCNQQGV RIYADVVINH 400
    MCGFGGSGHG TGGSYFNAEN LDFPAVPYGS NDFNNCSTCG TSDCKVQSYD 450
    DVNQVSPPNE NRVIAIPYRP WWERYQPISY HLNTRSGNDE DFRDMVHRCN 500
    QQGVRVCVSL KPPATFGSCP KLLTTFLLHF NPSLRPKELR AQGSPLVWTT 550
    NNPNNAATVN SQGYGYTPLN QWGDHYWMLD VDMDCSRTEY GWFEVKAMTI 600
    VRYPGGGVQW ESDRNQGTCG GTAGGTKPYS SGNHFARCGK INAFDFDGNA 650
    CTINEF 656
    Length:656
    Mass (Da):73,369
    Last modified:July 28, 2009 - v1
    Checksum:iF89C231CD404075B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG666601 Genomic DNA. Translation: EEN50591.1.
    RefSeqiXP_002594580.1. XM_002594534.1.

    Genome annotation databases

    GeneIDi7211267.
    KEGGibfo:BRAFLDRAFT_77551.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG666601 Genomic DNA. Translation: EEN50591.1 .
    RefSeqi XP_002594580.1. XM_002594534.1.

    3D structure databases

    ProteinModelPortali C3ZA03.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7739.JGI77551.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7211267.
    KEGGi bfo:BRAFLDRAFT_77551.

    Phylogenomic databases

    eggNOGi COG0366.
    KOi K01176.
    OMAi RVIAIPY.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00632. Aamy_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 3 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S238N-H82Imported.
      Tissue: TestesImported.

    Entry informationi

    Entry nameiC3ZA03_BRAFL
    AccessioniPrimary (citable) accession number: C3ZA03
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3