Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

C3Z7P4

- C3Z7P4_BRAFL

UniProt

C3Z7P4 - C3Z7P4_BRAFL

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

DNA ligase

Gene

BRAFLDRAFT_69217

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:BRAFLDRAFT_69217Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
ProteomesiUP000001554: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI69217.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiC3Z7P4.
KOiK10747.
OMAiEMPNYDA.

Family and domain databases

Gene3Di1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3Z7P4 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQRSISSFF APRAKTPKQD TAATGHKSPL KTKNGSPPAF APGDDSPVKS
60 70 80 90 100
LPRKKKARRI IDSDDDDEDE EENVAMEIEP SKSADEQKEA KDVEKTPKEV
110 120 130 140 150
EKVKDESEDV PSPKMPRVTY NGPNLQSPGG IPKRKTARKQ LPTPKRKLVE
160 170 180 190 200
IKSPKSNGHT SPTAEEEESS AKKVKTEKKE EKEEKTEEKM EEDSPDEEVK
210 220 230 240 250
EKVKDEEEVV QQNKKKKSPK PKKEKQSPKS VDKKKKIKEE PGEKAKESAG
260 270 280 290 300
PSEDSMDSLF AAVIRKAGEA TAEEEKEETE EKKEKSTEDL KSPSDKKAVK
310 320 330 340 350
KEEDSSKKSS SGISSFFSPK RSSQPTDESS EKKPSPKPAA KPMAAFFKPK
360 370 380 390 400
QEADKTVPYL ALAKTFEAIE EVRARLKITE ILCNFFRSVI ALTPDDLVQC
410 420 430 440 450
VYLCLNKVGP AYEGLELGIG ETVLMKAIAE ATGRKMAQIK TDAQEKGDLG
460 470 480 490 500
IVAEVMTKKI NFIKGMFVAC RQSEARYLIR SLGGKLRIGL AEQSVLTALA
510 520 530 540 550
HAATLTPAGK DVLDAGKGKS SDALKKKLED AALILKTTYC EMPNYDAVIS
560 570 580 590 600
AMLKHGLEEL PKHCKLTPGT PLKPMLAHPT KGVSEVLRRF EGAEFTCEYK
610 620 630 640 650
YDGERAQIHM LENGEIHIYS RNQENNTSKY PDIIERMPKV NHDDVTSCII
660 670 680 690 700
DSEAVAWDPE NKKILPFQVL STRKRKDADQ SEIKVQVCVY AFDLLYLNGQ
710 720 730 740 750
SLVREPFRKR REMLRESFNE VEGEFVFATS MVSGNTEEIA VFLDASIKDS
760 770 780 790 800
CEGLMVKTLD KDATYEIAKR SHNWLKLKKD YLDGVGDTLD VVPIGGFLGT
810 820 830 840 850
GKRTGKYGGF LLACYSEEDE EFQSICKIGT GFKDEELEQH TEFFKNHVVD
860 870 880 890 900
KPKSYYRYDS SVEPDHWFDA VQVWEIKCAD LSISPVHKAA EGIVDPEKGI
910 920 930 940 950
SLRFPRFLRI RDDKKPEEAT SAQQVAEMYR NQDQVKNQQS NEKSEPADDD

FY
Length:952
Mass (Da):106,658
Last modified:July 28, 2009 - v1
Checksum:iF0778CE028E3CAF7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG666591 Genomic DNA. Translation: EEN51399.1.
RefSeqiXP_002595387.1. XM_002595341.1.
UniGeneiBfl.7211.

Genome annotation databases

GeneIDi7228935.
KEGGibfo:BRAFLDRAFT_69217.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG666591 Genomic DNA. Translation: EEN51399.1 .
RefSeqi XP_002595387.1. XM_002595341.1.
UniGenei Bfl.7211.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7739.JGI69217.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7228935.
KEGGi bfo:BRAFLDRAFT_69217.

Phylogenomic databases

eggNOGi COG1793.
InParanoidi C3Z7P4.
KOi K10747.
OMAi EMPNYDA.

Family and domain databases

Gene3Di 1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S238N-H82Imported.
    Tissue: TestesImported.

Entry informationi

Entry nameiC3Z7P4_BRAFL
AccessioniPrimary (citable) accession number: C3Z7P4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: October 29, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3