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C3Z7P4 (C3Z7P4_BRAFL) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617

EC=6.5.1.1 RuleBase RU000617
Gene names
ORF Names:BRAFLDRAFT_69217 EMBL EEN51399.1
OrganismBranchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]
Taxonomic identifier7739 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma

Protein attributes

Sequence length952 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
C3Z7P4 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: F0778CE028E3CAF7

FASTA952106,658
        10         20         30         40         50         60 
MAQRSISSFF APRAKTPKQD TAATGHKSPL KTKNGSPPAF APGDDSPVKS LPRKKKARRI 

        70         80         90        100        110        120 
IDSDDDDEDE EENVAMEIEP SKSADEQKEA KDVEKTPKEV EKVKDESEDV PSPKMPRVTY 

       130        140        150        160        170        180 
NGPNLQSPGG IPKRKTARKQ LPTPKRKLVE IKSPKSNGHT SPTAEEEESS AKKVKTEKKE 

       190        200        210        220        230        240 
EKEEKTEEKM EEDSPDEEVK EKVKDEEEVV QQNKKKKSPK PKKEKQSPKS VDKKKKIKEE 

       250        260        270        280        290        300 
PGEKAKESAG PSEDSMDSLF AAVIRKAGEA TAEEEKEETE EKKEKSTEDL KSPSDKKAVK 

       310        320        330        340        350        360 
KEEDSSKKSS SGISSFFSPK RSSQPTDESS EKKPSPKPAA KPMAAFFKPK QEADKTVPYL 

       370        380        390        400        410        420 
ALAKTFEAIE EVRARLKITE ILCNFFRSVI ALTPDDLVQC VYLCLNKVGP AYEGLELGIG 

       430        440        450        460        470        480 
ETVLMKAIAE ATGRKMAQIK TDAQEKGDLG IVAEVMTKKI NFIKGMFVAC RQSEARYLIR 

       490        500        510        520        530        540 
SLGGKLRIGL AEQSVLTALA HAATLTPAGK DVLDAGKGKS SDALKKKLED AALILKTTYC 

       550        560        570        580        590        600 
EMPNYDAVIS AMLKHGLEEL PKHCKLTPGT PLKPMLAHPT KGVSEVLRRF EGAEFTCEYK 

       610        620        630        640        650        660 
YDGERAQIHM LENGEIHIYS RNQENNTSKY PDIIERMPKV NHDDVTSCII DSEAVAWDPE 

       670        680        690        700        710        720 
NKKILPFQVL STRKRKDADQ SEIKVQVCVY AFDLLYLNGQ SLVREPFRKR REMLRESFNE 

       730        740        750        760        770        780 
VEGEFVFATS MVSGNTEEIA VFLDASIKDS CEGLMVKTLD KDATYEIAKR SHNWLKLKKD 

       790        800        810        820        830        840 
YLDGVGDTLD VVPIGGFLGT GKRTGKYGGF LLACYSEEDE EFQSICKIGT GFKDEELEQH 

       850        860        870        880        890        900 
TEFFKNHVVD KPKSYYRYDS SVEPDHWFDA VQVWEIKCAD LSISPVHKAA EGIVDPEKGI 

       910        920        930        940        950 
SLRFPRFLRI RDDKKPEEAT SAQQVAEMYR NQDQVKNQQS NEKSEPADDD FY 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GG666591 Genomic DNA. Translation: EEN51399.1.
RefSeqXP_002595387.1. XM_002595341.1.
UniGeneBfl.7211.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7739.JGI69217.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7228935.
KEGGbfo:BRAFLDRAFT_69217.

Phylogenomic databases

eggNOGCOG1793.
KOK10747.
OMAEMPNYDA.

Family and domain databases

Gene3D1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3Z7P4_BRAFL
AccessionPrimary (citable) accession number: C3Z7P4
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: March 19, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)