Putative uncharacterized protein - Branchiostoma floridae (Florida lancelet)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN52488.1

Gene names

ORF Names:

BRAFLDRAFT_130310 EMBL EEN52488.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	1033 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

C3Z4P9 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 084D861A339DFB73
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FASTA

1,033

117,300

        10         20         30         40         50         60 
MYTLRTFWTS GPKLARGVLS QGVPAALRGT PAQPARLLTT SVQQESFLNG SSSNYVEEMY 

        70         80         90        100        110        120 
LAWLDNPKSV HKSWDVFFRN AQRGAAPGEA YQSPPPMAAM MPVQPVAWPM MPLPAAPAVT 

       130        140        150        160        170        180 
SEQISGKVID DHLAVQAIIR SYQIRGHQCA KLDPLGIMEA DLDTSTPREL TLPYYRFSEE 

       190        200        210        220        230        240 
DLDRTFVLPQ TTFIGGGNTS LPLRDIIQRL EETYCQTIGL EYMHINDREK CDWIRQKFEI 

       250        260        270        280        290        300 
PGIMSMSNET KRLTLARLVR STRFEQFLAT KYPAEKRFGL EGCEVLIPAL KTIIDRCTEQ 

       310        320        330        340        350        360 
GAESFVMGMP HRGRLNVLAN VVRKDLDQIL CQFDSSLEAD DEGSGDVKYH LGCSHMRLNR 

       370        380        390        400        410        420 
TTNKSIKLAL VANPSHLEAV DPVVQGKTRA EQYYRGDIEG KKVMSILMHG DAAFAGQGVV 

       430        440        450        460        470        480 
FETFHLSDLP AYTTHGTIHV VVNNQIGFTT DPRFSRSSTY CTDVAKVVEA PIFHVNADDP 

       490        500        510        520        530        540 
EAVAHVCNVA ADWRSEFEKD VVIDLVCYRR GGHNEMDEPM FTQPLMYKQI GKQPTVLRQY 

       550        560        570        580        590        600 
AEKLISEGVV TQEEYEEEVS KYDKICEEAY QQAREEKILS IKHWLDSPWT DFFKDKTRDS 

       610        620        630        640        650        660 
MMVCESTGVG EDILTHVGTF MGSPPPDPKF TIHGGVKRIL RQRATMVKER WVDWAMAEAM 

       670        680        690        700        710        720 
AFGSLMHSGF HVRLSGQDVE RGTFSQRHHV LHDQNRDKVF WTPLDNLWPD QAPYTVCNSS 

       730        740        750        760        770        780 
LSEYAVMGFE LGYSMSNPNA LVLWEAQFGD FSNTAQCIID QFISSGQAKW VRQTGITLLL 

       790        800        810        820        830        840 
PHGYEGMGPE HSSARMERFL QMSTEDPDLY PEIDERFEIR QLFDHNWIVA NCTTPANYFH 

       850        860        870        880        890        900 
LLRRQVLLPF RKPLVVMTPK SLLRHPEARS SFDDMLPGTT FQRLIPDLGP AGQNHEQVQR 

       910        920        930        940        950        960 
LIFCTGKVYY DLTKERKARD LDDKIAIVRI EQISPFPFDM VKQQCDLYPN ADLVWAQEEH 

       970        980        990       1000       1010       1020 
KNMGAWNYIQ PRIRTTVNRE RHVSYAGRAS AAAAATGAKQ SHQQELTRLL QHAMNLDNHV 

      1030 
ALWQSQPRRN LTG

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References

[1]

"The amphioxus genome and the evolution of the chordate karyotype."
US DOE Joint Genome Institute (JGI-PGF)
Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J.

Rokhsar D.S.
Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S238N-H82 EMBL EEN52488.1.
Tissue: Testes EMBL EEN52488.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666580 Genomic DNA. Translation: EEN52488.1.
RefSeq	XP_002596476.1. XM_002596430.1.
UniGene	Bfl.6660.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	7739.JGI130310.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7208877.
KEGG	bfo:BRAFLDRAFT_130310.
Phylogenomic databases
eggNOG	COG0567.
KO	K00164.
OMA	IIKRGGA.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3Z4P9_BRAFL

Accession

Primary (citable) accession number: C3Z4P9

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	April 3, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information